Metrikler
Yayın
285
Açık Erişim
47
BM Sürdürülebilir Kalkınma Amaçları
Duyurular & Dokümanlar
Dosya İndir
Eğitim Bilgileri
1985 - 1987
1985 - 1987Yüksek Lisans
Boğaziçi Üniversitesi, Biyomedikal Mühendisliği Enstitüsü, Biyomedikal Elektronik Anabilim Dalı, Türkiye
1985 - 1987
1985 - 1987Doktora
Boston University, Biyomedikal Mühendisliği, Amerika Birleşik Devletleri
1981 - 1985
1981 - 1985Lisans
Boğaziçi Üniversitesi, Mühendislik Fakültesi, Elektrik-Elektronik Mühendisliği Bölümü, Türkiye
Araştırma Alanları
Mikrobiyoloji
Biyoenformatik
Yapay Zeka, Bilgisayarda Öğrenme ve Örüntü Tanıma
Biyoinformatik
Akademik Faaliyetlere Dayalı Araştırma Alanları
Avesis Araştırma Alanları
WoS Araştırma Alanları
Scopus Araştırma Alanları
Akademik Ünvanlar / Görevler
2006 - Devam Ediyor
2006 - Devam EdiyorDoç. Dr.
Sabancı Üniversitesi, Mühendislik Ve Doğa Bilimleri Fakültesi
Yönetilen Tezler
2025
2025Doktora
Mechanical Complication Prediction in Well-Aligned Adult Spinal Deformity Patients, Privacy-Preserving ML Inferences with Blockchain Applications
Sezerman O. U. (Danışman)
B.BALABAN(Öğrenci)
2024
2024Doktora
Multi-omics integration and analysis of metagenomics and metabolomics data from rat model of acquired epilepsy
Sezerman O. U. (Danışman)
E.ŞAHİN(Öğrenci)
2024
2024Doktora
Pan-cancer Analysis of Molecular Mechanisms Underlying Perineural Invasion for the Identification of Therapeutic Targets
Sezerman O. U. (Danışman)
S.ELİF(Öğrenci)
2024
2024Doktora
Developing algorithms to understand the role of microbiome and other omics in cancer disease mechanism and therapy
Sezerman O. U. (Danışman)
T.KARAMAN(Öğrenci)
2024
2024Yüksek Lisans
Identifying spatio-molecular distribution of vertebrate Olfactory bulb through SC-RNA sequencing in mouse and zebrafish
Sezerman O. U. (Danışman)
E.BERKAY(Öğrenci)
2024
2024Yüksek Lisans
LAMP based screening kit development to detect SMA from saliva
Tahir Turanlı E., Sezerman O. U. (Eş Danışman)
Ö.HÜLYA(Öğrenci)
2023
2023Yüksek Lisans
Establishing a human gut microbiome bioinformatics analysis pipeline to study a dietary treatment response for methylmalonic acidemia patients
Sezerman O. U. (Danışman)
B.YEKTA(Öğrenci)
2020
2020Yüksek Lisans
Transcriptomics-based Investigation of Drug Resistance Mechanisms of Triple Negative Breast Cancer Cell Line
Sezerman O. U., Bozaykut Eker P. (Eş Danışman)
R.Ekren(Öğrenci)
2005
2005Yüksek Lisans
Covalent modification of enzymes for textile processes
Sezerman O. U. (Danışman)
G.BAYRAM(Öğrenci)
Makaleler
Tümü (188)
SCI-E, SSCI, AHCI (174)
SCI-E, SSCI, AHCI, ESCI (178)
ESCI (3)
Scopus (180)
TRDizin (2)
Diğer Yayınlar (3)
2026
20261. DPAS: disease-associated peptide anomaly score for identifying pathogenic peptides via one-class learning
Khalid Z., Khalid R., SEZERMAN O. U.
Scientific Reports
, cilt.16, sa.1, 2026 (SCI-Expanded, Scopus)
2026
20262. Dietary Protein Modulation, Gut Microbiota, and Metabolic Control in Methylmalonic Acidemia: A Prospective Longitudinal Study
KÖSE E., EKREN B. Y., Doğulu N., Yolcu F., EYLEM C. C., NEMUTLU E., et al.
Journal of Inherited Metabolic Disease
, cilt.49, sa.2, 2026 (SCI-Expanded, Scopus)
2026
20263. Changes in the microbiota following allogeneic hematopoietic stem cell transplantation: A potential bioguide for clinical outcome?
Gurer-Kluge E. E., Oguz F. S., Aktas Z., BEŞIŞIK S., SEZERMAN O. U., Oncul O., et al.
Hematology, Transfusion and Cell Therapy
, cilt.48, sa.1, 2026 (ESCI, Scopus)
2026
20264. Comprehensive Transcriptomic Analysis and Biomarker Prioritization of Hydroxyprogesterone in Breast Cancer
Rafi A., Tüzmen Ş., SEZERMAN O. U., Dirilenoğlu F.
Current Issues in Molecular Biology
, cilt.48, sa.1, 2026 (SCI-Expanded, Scopus)
2025
20255. 3’UTR RNA editing driven by ADAR1 modulates MDM2 expression in breast cancer cells
Almeric E., Karagozoglu D., Cicek M., DÖKEN D. N., Tac H. A., Cicek E., et al.
Functional and Integrative Genomics
, cilt.25, sa.1, 2025 (SCI-Expanded, Scopus)
2025
20256. Transfer learning with multiomics integration and deep neural networks reveals drug resistance mechanisms in cancer
Alpsoy S., SEZERMAN O. U.
Scientific Reports
, cilt.15, sa.1, 2025 (SCI-Expanded, Scopus)
2025
20257. Genomic and Immunoinformatics Insights Into a Bovine-Derived Brucella abortus S19 Field Strain: Adaptations Impacting Vaccine Efficacy
Arslan A., AKTAŞ E., SEZERMAN O. U., ÖZBEK T.
VETERINARY MEDICINE AND SCIENCE
, cilt.11, sa.6, 2025 (SCI-Expanded, Scopus)
2025
20258. Identification of potential antigenic proteins and epitopes for the development of a monkeypox virus vaccine: an in silico approach
AKTAŞ E., SEZERMAN O. U., Ozer M., KIRBOĞA K. K., Koseoglu A. E., Ozgenturk N. O.
MOLECULAR DIVERSITY
, cilt.29, sa.5, ss.4273-4291, 2025 (SCI-Expanded, Scopus)
2025
20259. Co-occurrence of homozygous ALMS1 variant, 17q11.2 mosaic and germline deletions, and VSX2 nonsense variant in a single family
Mammadova N., Yildirim A. B., Sevim D. G., Bozkurt T., SEZERMAN O. U., Dundar M.
MOLECULAR BIOLOGY REPORTS
, cilt.52, sa.1, 2025 (SCI-Expanded, Scopus)
2025
202510. Medication-resistant epilepsy is associated with a unique gut microbiota signature
Riva A., Sahin E., Volpedo G., Catania N. T., Venara I., Biagioli V., et al.
Epilepsia
, cilt.66, sa.7, ss.2268-2284, 2025 (SCI-Expanded, Scopus)
2025
202511. Preliminary Study to Understand the Role of Gut Microbiota in Coronary Slow Flow Phenomenon (CSFP)
GÜROL T., Karaman T., Gurol Y., SEZERMAN O. U., ÖKTEM OKULLU S.
Metabolites
, cilt.15, sa.7, 2025 (SCI-Expanded, Scopus)
2025
202512. The Metabolic Profile of Plasma During Epileptogenesis in a Rat Model of Lithium-Pilocarpine-Induced Temporal Lobe Epilepsy
Antmen M., Matpan E., Dayanc E., Savas E. O., Eken Y., Acar D., et al.
MOLECULAR NEUROBIOLOGY
, cilt.62, sa.6, ss.7469-7483, 2025 (SCI-Expanded, Scopus)
2025
202513. Exploring the role of microbiome in cystic fibrosis clinical outcomes through a mediation analysis
KOLDAŞ S. S., SEZERMAN O. U., Timuçin E.
mSystems
, cilt.10, sa.6, 2025 (SCI-Expanded, Scopus)
2025
202514. Biomarkers, omics and artificial intelligence for early detection of pancreatic cancer
Murray K., Oldfield L., Stefanova I., Gentiluomo M., Aretini P., O'Sullivan R., et al.
Seminars in Cancer Biology
, cilt.111, ss.76-88, 2025 (SCI-Expanded, Scopus)
2025
202515. Exome sequencing reveals low-frequency and rare variant contributions to multiple sclerosis susceptibility in Turkish families.
Büyükgöl F., Gürdamar B., Aluçlu M. U., Beckmann Y., Bilguvar K., Boz C., et al.
Scientific reports
, cilt.15, sa.1, ss.11682, 2025 (SCI-Expanded, Scopus)
2025
202516. Pathway-Specific Insights into Colorectal Cancer Through Comprehensive Multi-Omics Data Integration
Öktem Okullu S., Bayram Akçapınar G., Sezerman O. U.
BIOLOGY , cilt.14, sa.5, ss.1-5, 2025 (SCI-Expanded, Scopus)
2025
202517. Investigation of a pathogenic inversion in UNC13D and comprehensive analysis of chromosomal inversions across diverse datasets.
Bozkurt-Yozgatli T., Lun M. Y., Bengtsson J. D., Sezerman U., Chinn I. K., Coban-Akdemir Z., et al.
European journal of human genetics : EJHG
, 2025 (SCI-Expanded, Scopus)
2025
202518. Urinary Metabolic Profiling During Epileptogenesis in Rat Model of Lithium-Pilocarpine-Induced Temporal Lobe Epilepsy
Antmen M., Dongel Dayanc E., Süyen G., Serteser M., Sezerman O. U., Baykal A. T.
BIOMEDICINES
, cilt.13, sa.3, 2025 (SCI-Expanded, Scopus)
2025
202519. A collaborative network analysis for the interpretation of transcriptomics data in Huntington's disease.
Ozisik O., Kara N. S., Abbassi-Daloii T., Térézol M., Kuijper E. C., Queralt-Rosinach N., et al.
Scientific reports
, cilt.15, sa.1, ss.1412, 2025 (SCI-Expanded, Scopus)
2025
202520. Deciphering drought-response in wheat (Triticum aestivum): physiological, biochemical, and transcriptomic insights into tolerant and sensitive cultivars under dehydration shock
Cevher-Keskin B., Yıldızhan Y., Sekmen A. H., FAYETÖRBAY R., SEZERMAN O. U., Özer B., et al.
Frontiers in Plant Science
, cilt.16, 2025 (SCI-Expanded, Scopus)
2025
202521. Privacy-Preserving Machine Learning (PPML) Inference for Clinically Actionable Models
Balaban B., Magara S. S., Yilgor C., Yucekul A., Obeid I., Pizones J., et al.
IEEE Access
, cilt.13, ss.37431-37456, 2025 (SCI-Expanded, Scopus)
2025
202522. Oral Presentation Abstracts
Yilmaz L. N., Bozkurt Yozgatli T., Özçelik F., Yıldırım A., Sezerman O. U., Dündar M.
EUROBIOTECH JOURNAL , cilt.9, sa.1, ss.30, 2025 (ESCI)
2024
202423. Microbiota alterations are related to migraine food triggers and inflammatory markers in chronic migraine patients with medication overuse headache
VURALLI D., Ceren Akgor M., Dagidir H. G., Onat P., YALINAY A. M., SEZERMAN O. U., et al.
JOURNAL OF HEADACHE AND PAIN
, cilt.25, sa.1, 2024 (SCI-Expanded, Scopus)
2024
202424. Multilocus pathogenic variants contribute to intrafamilial clinical heterogeneity: a retrospective study of sibling pairs with neurodevelopmental disorders
Bozkurt-Yozgatli T., Pehlivan D., Gibbs R. A., SEZERMAN O. U., Posey J. E., Lupski J. R., et al.
BMC MEDICAL GENOMICS
, cilt.17, sa.1, 2024 (SCI-Expanded, Scopus)
2024
202425. Proteomics profiling and machine learning in nusinersen-treated patients with spinal muscular atrophy
Panicucci C., Sahin E., Bartolucci M., Casalini S., Brolatti N., Pedemonte M., et al.
CELLULAR AND MOLECULAR LIFE SCIENCES
, cilt.81, sa.1, 2024 (SCI-Expanded, Scopus)
2024
202426. Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysis
Szydlowski L. M., Bulbul A. A., Simpson A. C., Kaya D. E., Singh N. K., Sezerman U. O., et al.
MICROBIOME
, cilt.12, sa.1, 2024 (SCI-Expanded, Scopus)
2024
202427. A microdeletion event at 19q13.43 in IDH-mutant astrocytomas is strongly correlated with MYC overexpression
Ulgen E., Gerlevik U., Gerlevik S., OKTAY Y., SEZERMAN O. U., Turcan S., et al.
ACTA NEUROPATHOLOGICA COMMUNICATIONS
, cilt.12, sa.1, 2024 (SCI-Expanded, Scopus)
2024
202428. Investigation of a Pathogenic Inversion in UNC13D and Comprehensive Analysis of Chromosomal Inversions Across Diverse Datasets.
Bozkurt-Yozgatli T., Lun M. Y., Bengtsson J. D., Sezerman U., Chinn I. K., Coban-Akdemir Z., et al.
medRxiv : the preprint server for health sciences
, 2024 (Hakemli Dergi)
2024
202429. Investigation of the Impact of Antibiotic Administration on the Preterm Infants' Gut Microbiome Using Next-Generation Sequencing-Based 16S rRNA Gene Analysis
Aktas A., Ekren B. Y., YAŞA B., SEZERMAN O. U., NAKİPOĞLU Y.
ANTIBIOTICS-BASEL
, cilt.13, sa.10, 2024 (SCI-Expanded, Scopus)
2024
202430. The Potential Role of Boron in the Modulation of Gut Microbiota Composition: An In Vivo Pilot Study
Senturk N. B., Kasapoglu B., Sahin E., Ozcan O., OZANSOY M., Ozansoy M. B., et al.
PHARMACEUTICALS
, cilt.17, sa.10, 2024 (SCI-Expanded, Scopus)
2024
202431. RNA methylation sequencing shows different gene expression signatures for response to azacytidine therapy in high-grade myelodysplastic syndromes
Gulei D., Moisoiu V., Kegyes D., Drula R., Iluta S., Tigu A. B., et al.
JOURNAL OF CELLULAR AND MOLECULAR MEDICINE
, cilt.28, sa.18, 2024 (SCI-Expanded, Scopus)
2024
202432. Identification of an epilepsy-linked gut microbiota signature in a pediatric rat model of acquired epilepsy
Riva A., Sahin E., Volpedo G., Petretto A., Lavarello C., Di Sapia R., et al.
NEUROBIOLOGY OF DISEASE
, cilt.194, 2024 (SCI-Expanded, Scopus)
2024
202433. Longitudinal non-targeted metabolomic profiling of urine samples for monitoring of kidney transplantation patients
Yozgat I., Cakır Ü., Serdar M. A., Sahin S., Sezerman O. U., Nemutlu E., et al.
RENAL FAILURE
, cilt.46, sa.1, 2024 (SCI-Expanded, Scopus)
2024
202434. Var3PPred: variant prediction based on 3-D structure and sequence analyses of protein-protein interactions on autoinflammatory diseases
Bülbül A. A., TİMUÇİN E., TİMUÇİN A. C., SEZERMAN O. U., TAHİR TURANLI E.
PeerJ
, cilt.12, sa.5, 2024 (SCI-Expanded, Scopus)
2023
202335. Identification of Molecular and Genetic Resistance Mechanisms in a Candida auris Isolate in a Tertiary Care Center in Turkiye
ERTÜRK ŞENGEL B., Ekren B. Y., SAYIN E., Cerikcioglu N., SEZERMAN O. U., ODABAŞI Z.
MYCOPATHOLOGIA
, cilt.188, ss.929-936, 2023 (SCI-Expanded, Scopus)
2023
202336. Effect of the switch status of Helicobacter pylori outer inflammatory protein A on gastric diseases
ÖKTEM OKULLU S., Karaman T., Akcelik-Deveci S., TİMUÇİN E., SEZERMAN O. U., Mansur-Ozen N., et al.
AMB EXPRESS
, cilt.13, sa.1, 2023 (SCI-Expanded, Scopus)
2023
202337. Phenotype screens of murine pancreatic cancer identify a Tgf-α-Ccl2-paxillin axis driving human-like neural invasion
Wang X., Istvanffy R., Ye L., Teller S., Laschinger M., Diakopoulos K. N., et al.
JOURNAL OF CLINICAL INVESTIGATION
, cilt.133, sa.21, 2023 (SCI-Expanded, Scopus)
2023
202338. Nosocomial infection of C. auris in COVID-19 Intensive Care Unit in Turkiye and Phylogenetic Analysis of Isolates
ERTÜRK ŞENGEL B., Ekren B. Y., SAYIN E., TİGEN E., Seydaliyeva A., Cerikcioglu N., et al.
MYCOPATHOLOGIA
, cilt.188, ss.765-773, 2023 (SCI-Expanded, Scopus)
2023
202339. Microbiota Changes in Hodgkin and Non-Hodgkin Lymphoma Treatment: Assessment With Il-17 and Il-12 Levels
Gurer E. E., BEŞIŞIK S., SEZERMAN O. U., ERDEM F., OĞUZ F., Tiryaki T. O., et al.
CLINICAL LYMPHOMA MYELOMA & LEUKEMIA
, 2023 (SCI-Expanded, Scopus)
2023
202340. Metabolic pathways of potential miRNA biomarkers derived from liquid biopsy in epithelial ovarian cancer
GÜMÜŞOĞLU ACAR E., GÜNEL T., Hosseini M. K., DOĞAN B., Tekarslan E. E., Gurdamar B., et al.
ONCOLOGY LETTERS
, cilt.25, sa.4, 2023 (SCI-Expanded, Scopus)
2023
202341. Corneal bacterial microbiome in patients with keratoconus using next-generation sequencing-based 16S rRNA gene analysis
Tunc U., ÇELEBİ A. R. C., Ekren B. Y., Yildirim Y., Yildiz B. K., ÖKTEM OKULLU S., et al.
EXPERIMENTAL EYE RESEARCH
, cilt.228, 2023 (SCI-Expanded)
2023
202342. Metabolomic Analyses to Identify Candidate Biomarkers of Cystinosis
NEMUTLU E., ÖZALTIN F., Yabanoglu-Ciftci S., GÜLHAN B., EYLEM C. C., BAYSAL İ., et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
, cilt.24, sa.3, 2023 (SCI-Expanded, Scopus)
2023
202343. Gene pathway analysis of the endometrium at the start of the window of implantation in women with unexplained infertility and unexplained recurrent pregnancy loss: is unexplained recurrent pregnancy loss a subset of unexplained infertility?
Keleş I. D., GÜNEL T., Özgör B. Y., Ülgen E., GÜMÜŞOĞLU ACAR E., Hosseini M. K., et al.
Human Fertility
, cilt.26, sa.5, ss.1129-1141, 2023 (SCI-Expanded, Scopus)
2023
202344. PANACEA: network-based methods for pharmacotherapy prioritization in personalized oncology
Ulgen E., Ozisik O., SEZERMAN O. U.
BIOINFORMATICS
, sa.1, 2023 (SCI-Expanded, Scopus)
2023
202345. Building clinically actionable models for predicting mechanical complications in postoperatively well-aligned adult spinal deformity patients using XGBoost algorithm
Balaban B., YILGÖR İ. Ç., YUCEKUL A., Zulemyan T., Obeid I., Pizones J., et al.
Informatics in Medicine Unlocked
, cilt.37, 2023 (Scopus)
2023
202346. Effects of Ramadan intermittent fasting on gut microbiome: is the diet key?
Sağlam D., Arıtıcı Çolak G., Sahin E., Ekren B. Y., Sezerman O. U., Baş M.
FRONTIERS IN MICROBIOLOGY
, cilt.14, 2023 (SCI-Expanded, Scopus)
2023
202347. A comparison of various feature extraction and machine learning methods for antimicrobial resistance prediction in streptococcus pneumoniae
Kaya D. E., Ülgen E., KOCAGÖZ A. S., SEZERMAN O. U.
Frontiers in Antibiotics
, cilt.2, 2023 (Scopus)
2022
202248. Brave new surfactant world revisited by thermoalkalophilic lipases: computational insights into the role of SDS as a substrate analog
Shehata M., Unlu A., Iglesias-Fernandez J., Osuna S., SEZERMAN O. U., TİMUÇİN E.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS
, cilt.25, sa.3, ss.2234-2247, 2022 (SCI-Expanded, Scopus)
2022
202249. NOVEL SYNDROME: CRANIOFACIAL AND CENTRAL NERVOUS SYSTEM MALFORMATIONS, AND ATYPICAL HEMOLYTIC UREMIC SYNDROME ASSOCIATED WITH TSEN2 MUTATION
Canpolat N., Liu D., Atayar E., SAYGILI S. K., Kara N. S., Westfall T. A., et al.
PEDIATRIC NEPHROLOGY
, sa.11, ss.2814, 2022 (SCI-Expanded, Scopus)
2022
202250. CANDIDATE BIOMARKER(S) FOR CYSTINOSIS WITH OMIC-BASED TECHNOLOGY: FROM LABORATORY TO BED-SIDE
NEMUTLU E., EYLEM C. C., GÜLHAN B., BAYSAL İ., Yabanoglu-Ciftci S., Kir S., et al.
PEDIATRIC NEPHROLOGY
, sa.11, ss.2831, 2022 (SCI-Expanded, Scopus)
2022
202251. Colibactin possessing E. coli isolates in association with colorectal cancer and their genetic diversity among Pakistani population
Tariq H., Noreen Z., Ahmad A., Khan L., Ali M., Malik M., et al.
PLOS ONE
, cilt.17, sa.11 November, 2022 (SCI-Expanded, Scopus)
2022
202252. Is cutaneous microbiota a player in disease pathogenesis? Comparison of cutaneous microbiota in psoriasis and seborrheic dermatitis with scalp involvement
Kayiran M. A., Sahin E., Kocoglu E., SEZERMAN O. U., Gurel M. S., Karadag A. S.
INDIAN JOURNAL OF DERMATOLOGY VENEREOLOGY & LEPROLOGY
, cilt.88, sa.6, ss.738-748, 2022 (SCI-Expanded, Scopus)
2022
202253. Investigating the role of common and rare variants in multiplex multiple sclerosis families reveals an increased burden of common risk variation
Everest E., Ahangari M., Uygunoglu U., Tutuncu M., Bulbul A. A., Saip S., et al.
SCIENTIFIC REPORTS
, cilt.12, sa.1, 2022 (SCI-Expanded, Scopus)
2022
202254. A recursive molecular docking coupled with energy-based pose-rescoring and MD simulations to identify hsGC beta H-NOX allosteric modulators for cardiovascular dysfunctions
Khalid R. R., Maryam A., Cinaroglu S. S., Siddiqi A. R., SEZERMAN O. U.
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
, cilt.40, sa.13, ss.6128-6150, 2022 (SCI-Expanded, Scopus)
2022
202255. Integrated bioinformatics analysis of validated and circulating miRNAs in ovarian cancer
DOĞAN B., GÜMÜŞOĞLU ACAR E., Ulgen E., SEZERMAN O. U., GÜNEL T.
Genomics and Informatics
, cilt.20, sa.2, 2022 (Scopus)
2022
202256. Microbiota and Kegg analysis after allogeneic stem cell transplantation for hematological malignancies
Gurer E. E., OĞUZ F., AKTAŞ Z., BEŞIŞIK S., Sezerman U., ÖNCÜL M. O., et al.
HLA
, sa.5, ss.499, 2022 (SCI-Expanded, Scopus)
2022
202257. Understanding the Role of the Microbiome in Cancer Diagnostics and Therapeutics by Creating and Utilizing ML Models
Cekikj M., Jakimovska Özdemir M., Kalajdzhiski S., Özcan O., SEZERMAN O. U.
Applied Sciences (Switzerland)
, cilt.12, sa.9, 2022 (SCI-Expanded, Scopus)
2022
202258. Computational analysis of missense filamin-A variants, including the novel p.Arg484Gln variant of two brothers with periventricular nodular heterotopia
Gerlevik U., Saygi C., Cangül H., Kutlu A., Çaralan E. F., Topçu Y., et al.
PLoS ONE
, cilt.17, sa.5 5, 2022 (SCI-Expanded, Scopus)
2022
202259. Structural analysis of M1AP variants associated with severely impaired spermatogenesis causing male infertility
Gerlevik U., Ergoren M. C., SEZERMAN O. U., TEMEL Ş. G.
PeerJ
, 2022 (SCI-Expanded, Scopus)
2022
202260. A splice site mutation in the TSEN2 causes a new syndrome with craniofacial and central nervous system malformations, and atypical hemolytic uremic syndrome
CANPOLAT N., Liu D., Atayar E., SAYGILI S. K., Kara N. S., Westfall T. A., et al.
CLINICAL GENETICS
, cilt.101, ss.346-358, 2022 (SCI-Expanded, Scopus)
2022
202261. GUT MICROBIOTA EFFECTS IN HEMATOPOIETIC STEM CELL TRANSPLANT PATIENTS ALLOJENİK KÖK HÜCRE NAKİLLERİNDE MİKROBİYOTA ETKİSİ
Gürer E. E., Savran Oğuz F., Beşişik Kalayoğlu S., Aktaş Z., Gülbaş Z., Öncül M. O., et al.
Istanbul Tip Fakultesi Dergisi
, cilt.85, sa.3, ss.296-304, 2022 (Scopus, TRDizin)
2022
202262. Identifying and elucidating the roles of Y198N and Y204F mutations in the PAH enzyme through molecular dynamic simulations.
Aslan T., Yenenler-Kutlu A., Gerlevik U., Aktuglu Zeybek A. Ç., Kıykım E., Sezerman O. U., et al.
Journal of biomolecular structure & dynamics
, cilt.40, sa.19, ss.9018-9029, 2022 (SCI-Expanded, Scopus)
2021
202163. RDDSVM: accurate prediction of A-to-I RNA editing sites from sequence using support vector machines
Tac H. A., Koroglu M., SEZERMAN O. U.
FUNCTIONAL & INTEGRATIVE GENOMICS
, cilt.21, sa.5-6, ss.633-643, 2021 (SCI-Expanded, Scopus)
2021
202164. Molecular modelling of the FOXO4-TP53 interaction to design senolytic peptides for the elimination of senescent cancer cells.
Le H. H., Cinaroglu S. S., Manalo E. C., Ors A., Gomes M. M., Duan Sahbaz B., et al.
EBioMedicine
, cilt.73, ss.103646, 2021 (SCI-Expanded, Scopus)
2021
202165. A framework for validating AI in precision medicine: considerations from the European ITFoC consortium
Tsopra R., Fernandez X., Luchinat C., Alberghina L., Lehrach H., Vanoni M., et al.
BMC MEDICAL INFORMATICS AND DECISION MAKING
, cilt.21, sa.1, 2021 (SCI-Expanded, Scopus)
2021
202166. Investigation of multiple sclerosis-related pathways through the integration of genomic and proteomic data
Everest E., Ulgen E., UYGUNOĞLU U., TÜTÜNCÜ M., SAİP S., SEZERMAN O. U., et al.
PEERJ
, cilt.9, 2021 (SCI-Expanded, Scopus)
2021
202167. Bridging the Bridging Imidazolate in the Bimetallic Center of the Cu/Zn SOD1 and ALS
TİMUÇİN A. C., Cinaroglu S. S., SEZERMAN O. U., TİMUÇİN E.
FRONTIERS IN CHEMISTRY
, cilt.9, 2021 (SCI-Expanded, Scopus)
2021
202168. Microbiota analysis in allogeneic stem cell transplant patients with in AML and MDS
Gurer E. E., OĞUZ F., AKTAŞ Z., BEŞIŞIK S., ÖNCÜL M. O., SEZERMAN O. U., et al.
EUROPEAN JOURNAL OF IMMUNOLOGY
, cilt.51, ss.326, 2021 (SCI-Expanded, Scopus)
2021
202169. Re-analysis of whole-exome sequencing data reveals a novel splicing variant in the SLC2A1 in a patient with GLUT1 Deficiency Syndrome 1 accompanied by hemangioma: a case report
Bozkurt T., ALANAY Y., ISIK U., SEZERMAN O. U.
BMC MEDICAL GENOMICS
, cilt.14, sa.1, 2021 (SCI-Expanded, Scopus)
2021
202170. A global metagenomic map of urban microbiomes and antimicrobial resistance
Danko D., Bezdan D., Afshin E. E., Ahsanuddin S., Bhattacharya C., Butler D. J., et al.
CELL
, cilt.184, sa.13, ss.3376-3410, 2021 (SCI-Expanded, Scopus)
2021
202171. Endometrial gene expression profiling of recurrent implantation failure after in vitro fertilization
Albayrak I. G., Azhari F., Colak E. N., Balci B. K., Ulgen E., SEZERMAN O. U., et al.
MOLECULAR BIOLOGY REPORTS
, cilt.48, sa.6, ss.5075-5082, 2021 (SCI-Expanded, Scopus)
2021
202172. driveR: a novel method for prioritizing cancer driver genes using somatic genomics data
Ulgen E., SEZERMAN O. U.
BMC BIOINFORMATICS
, cilt.22, sa.1, 2021 (SCI-Expanded, Scopus)
2021
202173. Base-excess chloride; the best approach to evaluate the effect of chloride on the acid-base status: A retrospective study.
Gucyetmez B., Tuzuner F., Atalan H. K., Sezerman U., Gucyetmez K., Telci L.
PloS one
, cilt.16, 2021 (SCI-Expanded, Scopus)
2021
202174. Sequential filtering for clinically relevant variants as a method for clinical interpretation of whole exome sequencing findings in glioma
Ülgen E., Can Ö., Bilguvar K., Akyerli Boylu C., Kılıçturgay Yüksel Ş., Erşen Danyeli A., et al.
BMC MEDICAL GENOMICS
, cilt.14, sa.1, 2021 (SCI-Expanded, Scopus)
2021
202175. The importance of dysregulated miRNAs on ovarian cysts and epithelial ovarian cancer
Gumusoglu E., Gunel T., Hosseini M. K., Seymen N., Senol T., SEZERMAN O. U., et al.
EUROPEAN JOURNAL OF GYNAECOLOGICAL ONCOLOGY
, cilt.42, sa.1, ss.66-72, 2021 (SCI-Expanded, Scopus)
2021
202176. CogNet: classification of gene expression data based on ranked active-subnetwork- oriented KEGG pathway enrichment analysis
Yousef M., Ulgen E., SEZERMAN O. U.
PEERJ COMPUTER SCIENCE
, cilt.7, ss.1-20, 2021 (SCI-Expanded, Scopus)
2021
202177. A comprehensive study on identifying the structural and functional SNPs of human neuronal membrane glycoprotein M6A (GPM6A)
Khalid Z., SEZERMAN O. U.
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
, cilt.39, sa.8, ss.2693-2701, 2021 (SCI-Expanded, Scopus)
2020
202078. Mutations and Copy Number Alterations in IDH Wild-Type Glioblastomas Are Shaped by Different Oncogenic Mechanisms
Ulgen E., Karacan S., Gerlevik U., CAN Ö., Bilguvar K., OKTAY Y., et al.
BIOMEDICINES
, cilt.8, sa.12, 2020 (SCI-Expanded, Scopus)
2020
202079. Lipase and Water in a Deep Eutectic Solvent: Molecular Dynamics and Experimental Studies of the Effects of Water-In-Deep Eutectic Solvents on Lipase Stability.
Shehata M., Unlu A., Sezerman U., Timucin E.
The journal of physical chemistry. B
, cilt.124, ss.8801-8810, 2020 (SCI-Expanded, Scopus)
2020
202080. Intraoperative Neuromonitoring of Blink Reflex During Posterior Fossa Surgeries and its Correlation With Clinical Outcome.
Aydinlar E., Kocak M., Soykam H., Mat B., Dikmen P., Sezerman O., et al.
Journal of clinical neurophysiology : official publication of the American Electroencephalographic Society
, sa.0, 2020 (SCI-Expanded, Scopus)
2020
202081. Progesterone at high doses reduces the growth of U87 and A172 glioblastoma cells: Proteomic changes regarding metabolism and immunity
Altinoz M., Ucal Y., Yilmaz M., Kiris İ., Ozisik O., Sezerman U., et al.
CANCER MEDICINE
, cilt.9, sa.16, ss.5767-5780, 2020 (SCI-Expanded, Scopus)
2020
202082. Response Assessment With Molecular Characterization of Circulating Tumor Cells and Plasma MicroRNA Profiling in Patients With Locally Advanced Breast Cancer During Neoadjuvant Chemotherapy
AKKİPRİK M., Koca S., UĞURLU M. Ü., Ekren R., PEKER EYÜBOĞLU İ., Alan O., et al.
CLINICAL BREAST CANCER
, cilt.20, sa.4, ss.332-346, 2020 (SCI-Expanded, Scopus)
2020
202083. Analysis of Correlation between the Seven Important Helicobacter pylori (H. pylori) Virulence Factors and Drug Resistance in Patients with Gastritis
ÖKTEM OKULLU S., Cekic-Kipritci Z., Kilic E., Seymen N., Mansur-Ozen N., SEZERMAN O. U., et al.
GASTROENTEROLOGY RESEARCH AND PRACTICE
, cilt.2020, 2020 (SCI-Expanded, Scopus)
2020
202084. High-throughput profiling reveals perturbation of endoplasmic reticulum stress-related genes in atherosclerosis induced by high-cholesterol diet and the protective role of vitamin E
Bozaykut P., Ekren R., SEZERMAN O. U., Gladyshev V. N., Ozer N. K.
BIOFACTORS
, cilt.46, sa.4, ss.653-664, 2020 (SCI-Expanded, Scopus)
2020
202085. Probing the Structural Dynamics of the Catalytic Domain of Human Soluble Guanylate Cyclase.
Khalid R., Maryam A., Sezerman O. U., Mylonas E., Siddiqi A., Kokkinidis M.
Scientific reports
, cilt.10, ss.9488, 2020 (SCI-Expanded, Scopus)
2020
202086. Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment
Chng K. R., Li C., Bertrand D., Ng A. H. Q., Kwah J. S., Low H. M., et al.
NATURE MEDICINE
, cilt.26, sa.6, ss.941-954, 2020 (SCI-Expanded, Scopus)
2020
202087. Understanding thermal and organic solvent stability of thermoalkalophilic lipases: insights from computational predictions and experiments.
Shehata M., Timucin E., Venturini A., Sezerman O. U.
Journal of molecular modeling
, cilt.26, ss.122, 2020 (SCI-Expanded, Scopus)
2020
202088. Whole exome sequencing-based analysis to identify DNA damage repair deficiency as a major contributor to gliomagenesis in adult diffuse gliomas
Ulgen E., CAN Ö., Bilguvar K., OKTAY Y., AKYERLİ BOYLU C., Danyeli A., et al.
JOURNAL OF NEUROSURGERY
, cilt.132, sa.5, ss.1435-1446, 2020 (SCI-Expanded, Scopus)
2020
202089. HriGFP Novel Flourescent Protein: Expression and Applications
Saeed S., Mehreen H., Gerlevik U., Tariq A., Manzoor S., Noreen Z., et al.
MOLECULAR BIOTECHNOLOGY
, cilt.62, sa.5, ss.280-288, 2020 (SCI-Expanded, Scopus)
2020
202090. A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer.
Wagner A. H., Walsh B., Mayfield G., Tamborero D., Sonkin D., Krysiak K., et al.
Nature genetics
, cilt.52, sa.4, ss.448-457, 2020 (SCI-Expanded, Scopus)
2020
202091. Comparison of endometrial prostanoid profiles in three infertile subgroups: the missing part of receptivity?
Keles I. D., Ulgen E., Erkan M. B., ÇELİK S. E., AYDIN Y., ÖNEM A. N., et al.
FERTILITY AND STERILITY
, cilt.113, sa.3, ss.670-679, 2020 (SCI-Expanded, Scopus)
2020
202092. Adaptive phenotypic modulations lead to therapy resistance in chronic myeloid leukemia cells
Baykal-Kose S., Açıkgöz E., Yavuz A. S., Geyik O. G., Ateş H., Sezerman O. U., et al.
PLOS ONE
, cilt.15, sa.2, 2020 (SCI-Expanded, Scopus)
2020
202093. SARS-CoV-2 isolation and propagation from Turkish COVID-19 patients
TaŞtan C., Yurtsever B., Sir K., Dİlek K., Demİr S., Abanuz S., et al.
TURKISH JOURNAL OF BIOLOGY
, cilt.44, sa.3, ss.192-202, 2020 (SCI-Expanded, Scopus, TRDizin)
2019
201994. Investigation of base excision repair gene variants in late-onset Alzheimer's disease.
Ertuzun T., Semerci A., Cakir M. E., Ekmekçioğlu A., Gok M. O., Soltys D. T., et al.
PloS one
, cilt.14, 2019 (SCI-Expanded, Scopus)
2019
201995. Potential Marker Pathways in the Endometrium That May Cause Recurrent Implantation Failure
Bastu E., Demiral I., GÜNEL T., Ulgen E., GÜMÜŞOĞLU ACAR E., Hosseini M. K., et al.
REPRODUCTIVE SCIENCES
, cilt.26, sa.7, ss.879-890, 2019 (SCI-Expanded, Scopus)
2019
201996. Differential gene expression analysis of human cumulus cells
Demiray S. B., Goker E. N. T., Tavmergen E., Yilmaz O., Calimlioglu N., Soykam H. O., et al.
CLINICAL AND EXPERIMENTAL REPRODUCTIVE MEDICINE-CERM
, cilt.46, sa.2, ss.76-86, 2019 (ESCI)
2019
201997. Comparison of Dendritic Cell Activation by Virus-Based Vaccine Delivery Vectors Emphasizes the Transcriptional Downregulation of the Oxidative Phosphorylation Pathway.
Tsitoura E., Kazazi D., Oz-Arslan D., Sever E., Khalili S., Vassilaki N., et al.
Human gene therapy
, cilt.30, sa.4, ss.429-445, 2019 (SCI-Expanded, Scopus)
2019
201998. Identification of epilepsy related pathways using genome-wide DNA methylation measures: A trio-based approach
ÖZDEMİR Ö., Egemen E., UĞUR İŞERİ S. A., SEZERMAN O. U., BEBEK N., BAYKAL B., et al.
PLOS ONE
, cilt.14, sa.2, 2019 (SCI-Expanded, Scopus)
2019
201999. Enhancing Enzymatic Properties of Endoglucanase I Enzyme from Trichoderma Reesei via Swapping from Cellobiohydrolase I Enzyme
Yenenler A., Kurt H., SEZERMAN O. U.
CATALYSTS
, cilt.9, sa.2, 2019 (SCI-Expanded, Scopus)
2019
2019100. A possible founder mutation in FZD6 gene in a Turkish family with autosomal recessive nail dysplasia.
Saygi C., ALANAY Y., Sezerman U., Yenenler A., Ozoren N.
BMC medical genetics
, cilt.20, ss.15, 2019 (SCI-Expanded, Scopus)
2019
2019101. First Report and In Silico Analysis of Leishmania virus (LRV2) identified in an autochthonous Leishmania major isolate in Turkey.
Kurt Ö., Mansur N., Çavuş İ., Özcan O., Batir M., Gündüz C., et al.
The new microbiologica
, cilt.42, ss.64-67, 2019 (SCI-Expanded, Scopus)
2018
2018102. Detection of Immune-Response-Associated Pathways Involved in Oral Pre-Malignant Lesions and Hyper/ Hypomethylated Immune Genes Involved in these Pathways by Methylation Array Technology
Şen S., Özemek B., Ak G., Alatlı F. C., Sezerman O. U., Demokan S.
Eurasian Journal of Medicine and Oncology , cilt.1, ss.14-15, 2018 (Hakemli Dergi)
2018
2018103. Computational drug repurposing to predict approved and novel drug-disease associations.
Khalid Z., Sezerman O. U.
Journal of molecular graphics & modelling
, cilt.85, ss.91-96, 2018 (SCI-Expanded, Scopus)
2018
2018104. Ameliorative potential of Lavandula stoechas in metabolic syndrome via multitarget interactions
Kulabas S. S., Ipek H., Tufekci A. R., Arslan S., Demirtas I., Ekren R., et al.
JOURNAL OF ETHNOPHARMACOLOGY
, cilt.223, ss.88-98, 2018 (SCI-Expanded, Scopus)
2018
2018105. Investigating the structural properties of the active conformation BTL2 of a lipase from Geobacillus thermocatenulatus in toluene using molecular dynamic simulations and engineering BTL2 via in-silico mutation
Yenenler A., Venturini A., Burduroglu H. C., SEZERMAN O. U.
JOURNAL OF MOLECULAR MODELING
, cilt.24, sa.9, 2018 (SCI-Expanded, Scopus)
2018
2018106. Prediction of HIV Drug Resistance by Combining Sequence and Structural Properties.
Khalid Z., Sezerman O. U.
IEEE/ACM transactions on computational biology and bioinformatics
, cilt.15, sa.3, ss.966-973, 2018 (SCI-Expanded, Scopus)
2018
2018107. Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health.
Holub P., Kohlmayer F., Prasser F., Mayrhofer M. T., Schluender I., Martin G. M., et al.
Biopreservation and biobanking
, cilt.16, sa.2, ss.97-105, 2018 (SCI-Expanded, Scopus)
2018
2018108. Thermostability of the PYL-PP2C Heterodimer Is Dependent on Magnesium: In Silico Insights into the Link between Heat Stress Response and Magnesium Deficiency in Plants.
Timucin E., Sezerman O. U.
Journal of chemical information and modeling
, cilt.58, ss.661-672, 2018 (SCI-Expanded, Scopus)
2017
2017109. Expression of the bone morphogenetic protein-2 (BMP2) in the human cumulus cells as a biomarker of oocytes and embryo quality
Demiray S., Yilmaz O., Goker E., Tavmergen E., Calimlioglu N., SEZERMAN O. U., et al.
Journal of Human Reproductive Sciences
, cilt.10, sa.3, ss.194-200, 2017 (Scopus)
2017
2017110. ZK DrugResist 2.0: A TextMiner to extract semantic relations of drug resistance from PubMed.
Khalid Z., Sezerman O. U.
Journal of biomedical informatics
, cilt.69, ss.93-98, 2017 (SCI-Expanded, Scopus)
2017
2017111. Integrated Genomic and Proteomic Analyses of Multiple Sclerosis
Everest E., Uygunoglu U., Tutuncu M., SAİP S., SEZERMAN O. U., Siva A., et al.
NEUROLOGY
, cilt.88, 2017 (SCI-Expanded, Scopus)
2017
2017112. Computational approaches for <i>de novo</i> design and redesign of metal-binding sites on proteins.
Akcapinar G., Sezerman O. U.
Bioscience reports
, cilt.37, 2017 (SCI-Expanded, Scopus)
2017
2017113. An integrative study on the impact of highly differentially methylated genes on expression and cancer etiology.
Ozer B., Sezerman U.
PloS one
, cilt.12, sa.2, 2017 (SCI-Expanded, Scopus)
2017
2017114. In silico analyses and global transcriptional profiling reveal novel putative targets for Pea3 transcription factor related to its function in neurons
Kandemir B., Dag U., Gungor B. B., Durasi I. M., Erdogan B., Sahin E., et al.
PLOS ONE
, cilt.12, sa.2, 2017 (SCI-Expanded, Scopus)
2017
2017115. A Multiplex-Urease PCR Assay for Detection of Helicobacter pylori Infection Directly from Gastric Biopsy Specimens and Comparison of Multiplex- Urease PCR Results with Rapid Urease Test and Histopathology
ÖKTEM OKULLU S., TİFTİKÇİ A., SARUÇ M., ÇİÇEK B., VARDARELİ N. E., TÖZÜN A. N., et al.
Clinical Microbiology: Open Access
, cilt.6, 2017 (Hakemli Dergi)
2017
2017116. Active Subnetwork GA: A Two Stage Genetic Algorithm Approach to Active Subnetwork Search
Ozisik O., Bakir-Gungor B., DİRİ B., SEZERMAN O. U.
CURRENT BIOINFORMATICS
, cilt.12, sa.4, ss.320-328, 2017 (SCI-Expanded, Scopus)
2017
2017117. Analysis of the interplay between methylation and expression reveals its potential role in cancer aetiology.
Ozer B., Sezerman U.
Functional & integrative genomics
, cilt.17, sa.1, ss.53-68, 2017 (SCI-Expanded, Scopus)
2017
2017118. Ligand binding pocket of a novel Allatostatin receptor type C of stick insect, Carausius morosus
Sahbaz B. D., SEZERMAN O. U., TORUN H., BİRGÜL İYİSON N.
SCIENTIFIC REPORTS
, cilt.7, 2017 (SCI-Expanded, Scopus)
2016
2016119. Predicting the impact of mutations on the specific activity of Bacillus thermocatenulatus lipase using a combined approach of docking and molecular dynamics
Yukselen O., Timucin E., Sezerman U.
JOURNAL OF MOLECULAR RECOGNITION
, cilt.29, sa.10, ss.466-475, 2016 (SCI-Expanded, Scopus)
2016
2016120. RACK1 Is an Interaction Partner of ATG5 and a Novel Regulator of Autophagy
Erbil S., ORAL Ö., Mitou G., Kig C., Durmaz-Timucin E., Guven-Maiorov E., et al.
JOURNAL OF BIOLOGICAL CHEMISTRY
, cilt.291, sa.32, ss.16753-16765, 2016 (SCI-Expanded, Scopus)
2016
2016121. IDH-mutant glioma specific association of rs55705857 located at 8q24.21 involves MYC deregulation
OKTAY Y., Ulgen E., CAN Ö., AKYERLİ BOYLU C., Yuksel S., Erdemgil Y., et al.
SCIENTIFIC REPORTS
, cilt.6, 2016 (SCI-Expanded, Scopus)
2016
2016122. The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium inaugural meeting report
Chernomoretz A., Stolovitzky G., Labaj P. P., Graf A. B., Darling A., Burke C., et al.
MICROBIOME
, cilt.4, 2016 (SCI-Expanded, Scopus)
2016
2016123. Design and characterizations of two novel cellulases through single-gene shuffling of Cel12A (EG3) gene from Trichoderma reseei
Yenenler A., Sezerman O. U.
PROTEIN ENGINEERING DESIGN & SELECTION
, cilt.29, sa.6, ss.219-229, 2016 (SCI-Expanded, Scopus)
2016
2016124. Potential of GRID2 receptor gene for preventing TNF-induced neurodegeneration in autism
Kalkan Z., Durasi I. M., SEZERMAN O. U., Atasever-Arslan B.
NEUROSCIENCE LETTERS
, cilt.620, ss.62-69, 2016 (SCI-Expanded, Scopus)
2016
2016125. Systems Biological Applications for Fungal Gene Expression
Akcapinar G., SEZERMAN O. U.
GENE EXPRESSION SYSTEMS IN FUNGI: ADVANCEMENTS AND APPLICATIONS
, ss.385-393, 2016 (Hakemli Dergi)
2016
2016126. Probing the roles of two tryptophans surrounding the unique zinc coordination site in lipase family I.5
Timucin E., Cousido-Siah A., Mitschler A., Podjarny A., Sezerman O. U.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
, cilt.84, sa.1, ss.129-142, 2016 (SCI-Expanded, Scopus)
2016
2016127. Molecular docking of anthranoids on some targeted human proteins
Demirezer L. O., ÖZENVER N., Uzun M., Yukselen O., GÜVENALP Z., Sezerman O. U.
Fabad Journal of Pharmaceutical Sciences
, cilt.41, sa.1, ss.1-16, 2016 (Scopus)
2015
2015128. A novel analysis strategy for integrating methylation and expression data reveals core pathways for thyroid cancer aetiology
Ozer B., Sezerman O. U.
BMC GENOMICS
, cilt.16, 2015 (SCI-Expanded, Scopus)
2015
2015129. Prediction of neddylation sites from protein sequences and sequence-derived properties
Yavuz A. S., Sozer N. B., Sezerman O. U.
BMC BIOINFORMATICS
, cilt.16, 2015 (SCI-Expanded, Scopus)
2015
2015130. Assessment of global and gene-specific DNA methylation in rat liver and kidney in response to non-genotoxic carcinogen exposure
Ozden S., Kara N. T., SEZERMAN O. U., Durasi I. M., Chen T., Demirel G., et al.
TOXICOLOGY AND APPLIED PHARMACOLOGY
, cilt.289, sa.2, ss.203-212, 2015 (SCI-Expanded, Scopus)
2015
2015131. 'Epistatic interactions between autoimmunity and genetic thrombophilia' Reply
Bakir-Gungor B., Remmers E. F., Meguro A., Mizuki N., Kastner D. L., GÜL A., et al.
EUROPEAN JOURNAL OF HUMAN GENETICS
, cilt.23, sa.10, ss.1279-1280, 2015 (SCI-Expanded, Scopus)
2015
2015132. Multiplex-PCR-Based Screening and Computational Modeling of Virulence Factors and T-Cell Mediated Immunity in Helicobacter pylori Infections for Accurate Clinical Diagnosis
Oktem-Okullu S., TIFTIKCI A., SARUC M., Cicek B., Vardareli E., Tozun N., et al.
PLOS ONE
, cilt.10, sa.8, 2015 (SCI-Expanded, Scopus)
2015
2015133. Zinc Modulates Self-Assembly of Bacillus thermocatenulatus Lipase
Timucin E., Sezerman O. U.
BIOCHEMISTRY
, cilt.54, sa.25, ss.3901-3910, 2015 (SCI-Expanded, Scopus)
2015
2015134. Modulating the thermostability of Endoglucanase I from Trichoderma reesei using computational approaches
BAYRAM AKÇAPINAR G., Venturini A., Martelli P. L., Casadio R., Sezerman U. O.
PROTEIN ENGINEERING DESIGN & SELECTION
, sa.5, ss.127-135, 2015 (SCI-Expanded, Scopus)
2015
2015135. Identification of possible pathogenic pathways in Behcet's disease using genome-wide association study data from two different populations
Bakir-Gungor B., Remmers E. F., Meguro A., Mizuki N., Kastner D. L., GÜL A., et al.
EUROPEAN JOURNAL OF HUMAN GENETICS
, cilt.23, sa.5, ss.678-687, 2015 (SCI-Expanded, Scopus)
2015
2015136. CSF Proteomics Identifies Specific and Shared Pathways for Multiple Sclerosis Clinical Subtypes
Avsar T., Durasi I. M., Uygunoglu U., Tutuncu M., Demirci N. O., Saip S., et al.
PLOS ONE
, cilt.10, sa.5, 2015 (SCI-Expanded, Scopus)
2015
2015137. Molecular diversity of LysM carbohydrate-binding motifs in fungi
Akcapinar G., Kappel L., Sezerman O. U., Seidl-Seiboth V.
CURRENT GENETICS
, cilt.61, sa.2, ss.103-113, 2015 (SCI-Expanded, Scopus)
2014
2014138. Predicting sumoylation sites using support vector machines based on various sequence features, conformational flexibility and disorder
Yavuz A. S., Sezerman O. U.
BMC GENOMICS
, cilt.15, 2014 (SCI-Expanded, Scopus)
2014
2014139. PANOGA: a web server for identification of SNP-targeted pathways from genome-wide association study data
Bakir-Gungor B., Egemen E., Sezerman O. U.
BIOINFORMATICS
, cilt.30, sa.9, ss.1287-1289, 2014 (SCI-Expanded, Scopus)
2014
2014140. Direct in vitro selection of titanium-binding epidermal growth factor
Tada S., Timucin E., Kitajima T., Sezerman O. U., Ito Y.
BIOMATERIALS
, cilt.35, sa.11, ss.3497-3503, 2014 (SCI-Expanded, Scopus)
2013
2013141. The Conserved Lid Tryptophan, W211, Potentiates Thermostability and Thermoactivity in Bacterial Thermoalkalophilic Lipases
Timucin E., Sezerman O. U.
PLOS ONE
, cilt.8, sa.12, 2013 (SCI-Expanded, Scopus)
2013
2013142. MIR376A Is a Regulator of Starvation-Induced Autophagy
Korkmaz G., Tekirdag K. A., Ozturk D. G., Kosar A., Sezerman O. U., Gozuacik D.
PLOS ONE
, cilt.8, sa.12, 2013 (SCI-Expanded, Scopus)
2013
2013143. In silico docking researches of some human proteins with anthranoids
DEMİREZER L. Ö., Sezerman O. U., ÖZENVER N., Bodur M., Yukselen O., UZ A.
PLANTA MEDICA
, cilt.79, sa.13, ss.1175, 2013 (SCI-Expanded, Scopus)
2013
2013144. Identifying SNP targeted pathways in partial epilepsies with genome-wide association study data
Bakir-Gungor B., BAYKAL B., UĞUR İŞERİ S. A., TUNCER KILINÇ F. N., Sezerman O. U.
EPILEPSY RESEARCH
, cilt.105, sa.1-2, ss.92-102, 2013 (SCI-Expanded, Scopus)
2013
2013145. Modifying the catalytic preference of tributyrin in Bacillus thermocatenulatus lipase through in-silico modeling of enzyme-substrate complex
Durmaz E., Kuyucak S., Sezerman U.
PROTEIN ENGINEERING DESIGN & SELECTION
, cilt.26, sa.5, ss.325-333, 2013 (SCI-Expanded, Scopus)
2013
2013146. The Identification of Pathway Markers in Intracranial Aneurysm Using Genome-Wide Association Data from Two Different Populations
Bakir-Gungor B., Sezerman O. U.
PLOS ONE
, cilt.8, sa.3, 2013 (SCI-Expanded, Scopus)
2013
2013147. The Vroman effect: Competitive protein exchange with dynamic multilayer protein aggregates
Hirsh S. L., McKenzie D. R., Nosworthy N. J., Denman J. A., Sezerman O. U., Bilek M. M. M.
COLLOIDS AND SURFACES B-BIOINTERFACES
, cilt.103, ss.395-404, 2013 (SCI-Expanded, Scopus)
2013
2013148. Prediction of peptides binding to MHC class I and II alleles by temporal motif mining
Meydan C., Otu H. H., Sezerman O. U.
BMC BIOINFORMATICS
, cilt.14, 2013 (SCI-Expanded, Scopus)
2013
2013149. Testing robustness of relative complexity measure method constructing robust phylogenetic trees for Galanthus L. Using the relative complexity measure
Bakis Y., Otu H. H., Tasci N., Meydan C., Bilgin N., YÜZBAŞIOĞLU İ. S., et al.
BMC BIOINFORMATICS
, cilt.14, 2013 (SCI-Expanded, Scopus)
2013
2013150. Protein Homology Analysis for Function Prediction with Parallel Sub-Graph Isomorphism
Kucukural A., Szilagyi A., Sezerman O. U., Zhang Y.
BIOINFORMATICS: CONCEPTS, METHODOLOGIES, TOOLS, AND APPLICATIONS
, ss.386-399, 2013 (SCI-Expanded)
2013
2013151. Stress effects caused by the expression of a mutant cellobiohydrolase I and proteasome inhibition in Trichoderma reesei Rut-C30
Kautto L., Grinyer J., Paulsen I., Tetu S., Pillai A., Pardiwalla S., et al.
NEW BIOTECHNOLOGY
, cilt.30, sa.2, ss.183-191, 2013 (SCI-Expanded, Scopus)
2012
2012152. A novel magnetic particle-modified electrochemical sensor for immunosensor applications
Altintas Z., Kallempudi S. S., SEZERMAN O. U., Gurbuz Y.
SENSORS AND ACTUATORS B-CHEMICAL
, cilt.174, ss.187-194, 2012 (SCI-Expanded, Scopus)
2012
2012153. Discrimination of Thermophilic and Mesophilic Proteins Using Reduced Amino Acid Alphabets with n-Grams
Albayrak A., Sezerman U. O.
CURRENT BIOINFORMATICS
, cilt.7, sa.2, ss.152-158, 2012 (SCI-Expanded, Scopus)
2012
2012154. From in silico to in vitro: Modelling and production of Trichoderma reesei endoglucanase 1 and its mutant in Pichia pastoris
Akcapinar G., Gul O., Sezerman U. O.
JOURNAL OF BIOTECHNOLOGY
, cilt.159, sa.1-2, ss.61-68, 2012 (SCI-Expanded, Scopus)
2012
2012155. Improved Thermostability of Clostridium thermocellum Endoglucanase Cel8A by Using Consensus-Guided Mutagenesis
Anbar M., Gul O., Lamed R., Sezerman U. O., Bayer E. A.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY
, cilt.78, sa.9, ss.3458-3464, 2012 (SCI-Expanded, Scopus)
2012
2012156. A homologous production system for Trichoderma reesei secreted proteins in a cellulase-free background
Uzbas F., Sezerman U., Hartl L., Kubicek C. P., Seiboth B.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
, cilt.93, sa.4, ss.1601-1608, 2012 (SCI-Expanded, Scopus)
2011
2011157. Classification of GPCRs Using Family Specific Motifs
Cobanoglu M. C., Saygin Y., Sezerman U.
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
, cilt.8, sa.6, ss.1495-1508, 2011 (SCI-Expanded, Scopus)
2011
2011158. A New Methodology to Associate SNPs with Human Diseases According to Their Pathway Related Context
Bakir-Gungor B., Sezerman O. U.
PLOS ONE
, cilt.6, sa.10, 2011 (SCI-Expanded, Scopus)
2011
2011159. Effect of Codon Optimization on the Expression of Trichoderma reesei Endoglucanase 1 in Pichia pastoris
Akcapinar G., Gul O., Sezerman U.
BIOTECHNOLOGY PROGRESS
, cilt.27, sa.5, ss.1257-1263, 2011 (SCI-Expanded, Scopus)
2011
2011160. Novel Hydrophobins from Trichoderma Define a New Hydrophobin Subclass: Protein Properties, Evolution, Regulation and Processing
Seidl-Seiboth V., Gruber S., Sezerman U., Schwecke T., Albayrak A., Neuhof T., et al.
JOURNAL OF MOLECULAR EVOLUTION
, cilt.72, sa.4, ss.339-351, 2011 (SCI-Expanded, Scopus)
2011
2011161. Structural characterization of recombinant bovine Go alpha by spectroscopy and homology modeling
MEGA TİBER P., ORUN O., NACAR C., Sezerman U. O., Severcan F., Severcan M., et al.
SPECTROSCOPY-BIOMEDICAL APPLICATIONS
, cilt.26, sa.4-5, ss.213-229, 2011 (SCI-Expanded)
2010
2010162. Generation and Analysis of Expressed Sequence Tags from Olea europaea L.
Ozgenturk N. O., Oruc F., Sezerman U., Kucukural A., VURAL KORKUT Ş., Toksoz F., et al.
COMPARATIVE AND FUNCTIONAL GENOMICS
, cilt.2010, 2010 (SCI-Expanded)
2010
2010163. Biomarker discovery for toxicity
Meydan C., Sezerman O. U.
NEUROCOMPUTING
, cilt.73, sa.13-15, ss.2384-2393, 2010 (SCI-Expanded, Scopus)
2010
2010164. Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets
Albayrak A., Otu H. H., Sezerman U. O.
BMC BIOINFORMATICS
, cilt.12, 2010 (SCI-Expanded, Scopus)
2009
2009165. An Ariadnes thread to the identification and annotation of noncoding RNAs in eukaryotes
Solda G., Makunin I. V., Sezerman O. U., Corradin A., Corti G., Guffanti A.
BRIEFINGS IN BIOINFORMATICS
, cilt.10, sa.5, ss.475-489, 2009 (SCI-Expanded, Scopus)
2009
2009166. Community-wide assessment of GPCR structure modelling and ligand docking: GPCR Dock 2008
Michino M., Abola E., Brooks C. L., Dixon J. S., Moult J., Stevens R. C., et al.
NATURE REVIEWS DRUG DISCOVERY
, cilt.8, sa.6, ss.455-463, 2009 (SCI-Expanded, Scopus)
2009
2009167. EnzyMiner: automatic identification of protein level mutations and their impact on target enzymes from PubMed abstracts
Yeniterzi S., Sezerman U.
BMC BIOINFORMATICS
, cilt.10, 2009 (SCI-Expanded, Scopus)
2008
2008168. Label-Free Biosensors for the Detection and Quantification of Cardiovascular Risk Markers
Saravan K. S., Gul O., Basaga H., Sezerman U., Gurbuz Y.
SENSOR LETTERS
, cilt.6, sa.6, ss.873-877, 2008 (SCI-Expanded)
2007
2007169. Application of automatic mutation-gene pair extraction to diseases
Erdogmus M., Sezerman O. U.
Journal of Bioinformatics and Computational Biology
, cilt.5, sa.6, ss.1261-1275, 2007 (Scopus)
2007
2007170. Sandwich-type, antibody microarrays for the detection and quantification of cardiovascular risk markers
Gul O., Calay E., Sezerman U., Basaga H., Gurbuz Y.
SENSORS AND ACTUATORS B-CHEMICAL
, cilt.125, sa.2, ss.581-588, 2007 (SCI-Expanded, Scopus)
2006
2006171. Molecular characterization of cDNA encoding resistance gene-like sequences in Buchloe dactyloides
Budak H., Kasap Z., Shearman R. C., Dweikat I., Sezerman U., Mahmood A.
MOLECULAR BIOTECHNOLOGY
, cilt.34, sa.3, ss.293-301, 2006 (SCI-Expanded, Scopus)
2006
2006172. Functional classification of G-Protein Coupled Receptors, based on their specific ligand coupling patterns
Bakir B., Sezerman O. U.
APPLICATIONS OF EVOLUTIONARY COMPUTING, PROCEEDINGS
, cilt.3907, ss.1-12, 2006 (SCI-Expanded)
2005
2005173. Triticum durum metallothionein - Isolation of the gene and structural characterization of the protein using solution scattering and molecular modeling
Bilecen K., Ozturk U., Duru A., Sutlu T., Petoukhov M., Svergun D., et al.
JOURNAL OF BIOLOGICAL CHEMISTRY
, cilt.280, sa.14, ss.13701-13711, 2005 (SCI-Expanded, Scopus)
2004
2004174. Protein structural class determination using support vector machines
IŞIK Z., Yanikoglu B., Sezerman U.
COMPUTER AND INFORMATION SCIENCES - ISCIS 2004, PROCEEDINGS
, cilt.3280, ss.82-89, 2004 (SCI-Expanded)
2001
2001175. Repair of lacerated inferior vena cava with the intravascular tube graft in redo cardiac surgery
Güney M., Aksoy N., SEZERMAN O. U.
JOURNAL OF THORACIC AND CARDIOVASCULAR SURGERY
, cilt.121, sa.1, ss.187-188, 2001 (SCI-Expanded, Scopus)
1996
1996176. Pre- and post-therapy thallium-201 and technetium-99m-sestamibi SPECT in nasopharyngeal carcinoma
Kostakoglu L., Uysal U., Ozyar E., Elahi N., Hayran M., Uzal D., et al.
JOURNAL OF NUCLEAR MEDICINE
, cilt.37, sa.12, ss.1956-1962, 1996 (SCI-Expanded, Scopus)
1996
1996177. TcR recognition of the MHC-peptide dimer: Structural properties of a ternary complex
Vasmatzis G., Cornette J., Sezerman U., DeLisi C.
JOURNAL OF MOLECULAR BIOLOGY
, cilt.261, sa.1, ss.72-89, 1996 (SCI-Expanded, Scopus)
1996
1996178. Free energy mapping of class I MHC molecules and structural determination of bound peptides
Sezerman U., Vajda S., DeLisi C.
PROTEIN SCIENCE
, cilt.5, sa.7, ss.1272-1281, 1996 (SCI-Expanded, Scopus)
1996
1996179. Color Doppler imaging in adjunct to contrast arteriography in evaluation of severe peripheral vascular disease
Alhan H., Alhan S., Cinar B., Tuygun A., Sezerman O. U.
VASCULAR SURGERY
, sa.1, ss.13-19, 1996 (SCI-Expanded)
1995
1995180. Tricuspid valve repair by septal or posterior leaflet transposition
Kalangos A., Baldovinos A., SEZERMAN O. U., Faidutti B.
ANNALS OF THORACIC SURGERY
, cilt.60, sa.6, ss.1807-1809, 1995 (SCI-Expanded, Scopus)
1994
1994181. INFLUENCE OF APROTININ ON EARLY GRAFT THROMBOSIS IN PATIENTS UNDERGOING MYOCARDIAL REVASCULARIZATION
KALANGOS A., TAYYARECI G., PRETRE R., DIDIO P., SEZERMAN O. U.
EUROPEAN JOURNAL OF CARDIO-THORACIC SURGERY
, cilt.8, sa.12, ss.651-656, 1994 (SCI-Expanded, Scopus)
1993
1993182. TOWARD COMPUTATIONAL DETERMINATION OF PEPTIDE-RECEPTOR STRUCTURE
SEZERMAN U., VAJDA S., CORNETTE J., DELISI C.
PROTEIN SCIENCE
, cilt.2, sa.11, ss.1827-1843, 1993 (SCI-Expanded, Scopus)
1993
1993183. NECESSARY CONDITIONS FOR AVOIDING INCORRECT POLYPEPTIDE FOLDS IN CONFORMATIONAL SEARCH BY ENERGY MINIMIZATION
VAJDA S., JAFRI M., SEZERMAN O. U., DELISI C.
BIOPOLYMERS
, cilt.33, sa.1, ss.173-192, 1993 (SCI-Expanded, Scopus)
1991
1991184. ANALYSIS OF AVIATION TURBINE FUEL COMPOSITION BY LASER RAMAN-SPECTROSCOPY
CHUNG W., WANG Q., SEZERMAN O. U., CLARKE R.
APPLIED SPECTROSCOPY
, cilt.45, sa.9, ss.1527-1532, 1991 (SCI-Expanded, Scopus)
1991
1991185. DETERMINATION OF AROMATIC COMPOSITION OF FUELS BY LASER RAMAN-SPECTROSCOPY
CLARKE R., CHUNG W., WANG Q., DEJESUS S., SEZERMAN O. U.
JOURNAL OF RAMAN SPECTROSCOPY
, cilt.22, sa.2, ss.79-82, 1991 (SCI-Expanded, Scopus)
1986
1986186. AUTONOMIC NERVOUS-SYSTEM REGULATION OF EPICARDIAL CORONARY VEIN SYSTOLIC AND DIASTOLIC BLOOD VELOCITY AS MEASURED BY A LASER DOPPLER-VELOCIMETER
HELLENBRAND W., KLASSEN G., ARMOUR J., SEZERMAN O. U., PATON B.
CANADIAN JOURNAL OF PHYSIOLOGY AND PHARMACOLOGY
, cilt.64, sa.12, ss.1463-1472, 1986 (SCI-Expanded, Scopus)
1985
1985187. THE VELOCITY OF BLOOD IN EPICARDIAL CORONARY VEINS
HELLENBRAND W., ARMOUR J., PATON B., SEZERMAN O. U., MURPHY L., KLASSEN G.
CLINICAL AND INVESTIGATIVE MEDICINE-MEDECINE CLINIQUE ET EXPERIMENTALE
, sa.3, 1985 (SCI-Expanded, Scopus)
1985
1985188. BEAT TO BEAT NEURAL REGULATION OF EPICARDIAL VEIN VELOCITY
KLASSEN G., HELLENBRAND W., ARMOUR J., MURPHY L., SEZERMAN O. U., PATON B.
CIRCULATION
, sa.4, ss.76, 1985 (SCI-Expanded, Scopus)
Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler
2024
20241. Gut dysfunction is a common signature in rodent models of acquired epilepsy
Vezzani A., Riva A., Sahin E., Volpedo G., Macchi A., Balosso S., et al.
15th European Epilepsy Congress, Rome, İtalya, 7 - 11 Eylül 2024, cilt.65, ss.104, (Özet Bildiri)
2024
20242. Alterations of Specific Metabolites During Epileptogenesis in Plasma of Rats with Lithium-Pilocarpine-Induced Temporal Lobe Epilepsy
Antmen M., Matpan E., Döngel Dayanç E., Savaş E. Ö., Eken Y., Acar D., et al.
FENS Forum 2024, Vienna, Avusturya, 25 - 29 Haziran 2024, (Özet Bildiri)
2023
20233. Classification of Variants in Systemic Autoinflammatory Diseases using 3D Structures and Protein-protein Interactions
Bülbül A., Timuçin E., Timuçin A. C., Sezerman O. U., Tahir Turanlı E.
American Society of Human Genetics Annual Meeting , Washington, Amerika Birleşik Devletleri, 1 - 05 Kasım 2023, ss.516, (Özet Bildiri)
2023
20234. Comprehensive Analysis of Low-Frequency Genetic Variants through Exome Sequencing in Familial Multiple Sclerosis
Tahir Turanlı E., Bülbül A. A., Siva A., Sezerman O. U.
75. American Society of Human Genetics Congress, Washington, Amerika Birleşik Devletleri, 1 - 05 Kasım 2023, ss.1, (Özet Bildiri)
2022
20225. Data Mining for Predicting Mechanical Complications in Postoperatively Well-Aligned Adult Spinal Deformity Patients using XgBoost Modelling
Alanay A., Yılgör İ. Ç., Yucekul A., Sezerman O. U.
Eurospine Annual Meeting , Milan, İtalya, 19 - 22 Ekim 2022, (Yayınlanmadı)
2022
20226. Corneal Bacterial Microbiome In Patients With Keratoconus Using Next-Generation Sequencing-Based 16S Gene Analysis
TUNÇ U., ÇELEBİ A. R. C., YILDIRIM Y., Kepez Yıldız B., SEZERMAN O. U., ÖKTEM OKULLU S., et al.
The 40th Congress of the ESCRS, Milan, İtalya, 06 Eylül 2022, (Tam Metin Bildiri)
2022
20227. HYBRID LEISHMANIA STRAINS AND CLINICAL LEISHMANIASIS: A KALA-AZAR CASE FROM TURKEY.
KURT Ö., ÖKTEM OKULLU S., Kaya D. E., Mansur Özen N., Aydın E. M., CAN Ö., et al.
ICOPA 22 World federation of parasitologist, COPENHAGEN, Danimarka, 21 - 26 Ağustos 2022, (Özet Bildiri)
2021
20218. İleri Biyoinformatik Analiz Yöntemleri Kullanılarak Keratokonus Hastaları ile Sağlıklı Olgular Arasında Oküler Yüzey Mikrobiyota Farklılığının Araştırılması
TUNÇ U., YILDIRIM Y., ÇELEBİ A. R. C., KEPEZ YILDIZ B., KIRGIZ A., ÖKTEM OKULLU S., et al.
TOD. 55. Ulusal Kongresi, Antalya, Türkiye, 03 Kasım 2021, (Tam Metin Bildiri)
2021
20219. Functional Analysis of Validated Circulating MicroRNA-Based Signature for Prediction of Ovarian Cancer
DOĞAN B., GÜMÜŞOĞLU E., ÜLGEN E., SEZERMAN O. U., GÜNEL T.
8th Multidisciplinary Cancer Research Congress, Bursa, Türkiye, 15 - 17 Ocak 2021, (Özet Bildiri)
2020
202010. Mutations and copy number alterations in diffuse gliomas are shaped by different mechanisms
ÖZDUMAN K., Ulgen E., Karacan S., Gerlevik U., CAN Ö., Bilguvar K., et al.
32nd EORTC-NCI-AACR Symposium on Molecular Targets and Cancer Therapeutics, ELECTR NETWORK, 24 - 25 Ekim 2020, (Özet Bildiri)
2019
201911. Oral premalin lezyonlarda rol oynayan immün-yanıt ilişkili yolaklar ve bu yolaklarda rol alan hiper/hipometile immün genlerin metilasyon array teknolojisi ile tespiti
Şen S., Özemek B., Ak G., Alatlı C., Sezerman O. U., Demokan S.
2. Ulusal İmmünoterapi ve Onkoloji Kongresi, Antalya, Türkiye, 31 Ekim - 04 Kasım 2019, ss.20, (Özet Bildiri)
2019
201912. Intraoperative neuromonitoring of blink reflex during skull base surgeries and its correlation with clinical outcome.
Aydınlar E., Koçak M., Soykam H. O., Mat B., Yalınay Dikmen P., Sezerman O. U., et al.
7 th Congress of the International Society of Intraoperative Neurophysiology and Educational Course, Vienna, Avusturya, 28 Ekim - 02 Kasım 2019, ss.84, (Özet Bildiri)
2019
201913. The Partitioned pH Model: the new mathematical model to evaluate acid-base status
Güçyetmez B., Sezerman O. U., Güçyetmez K., Telci L.
ESICM LIVES 2019, Berlin, Almanya, 28 Ekim - 02 Kasım 2019, ss.463, (Özet Bildiri)
2019
201914. Seizures, developmental delay, mild intellectual disability, muscular hypotonia, and optic atrophy: About the genetic diagnosis of patient with a novel ATP1A3 mutation
Saygi C., Sezerman U.
52nd Conference of the European-Society-of-Human-Genetics (ESHG), Gothenburg, İsveç, 15 - 18 Haziran 2019, cilt.27, ss.1863, (Özet Bildiri)
2019
201915. Investigation of the relationship between cellular adaptation and therapeutic resistance in chronic myeloid leukemia cells under imatinib pressure
Baykal Köse S., Yavuz S., AÇIKGÖZ E., GÖNÜL GEYİK Ö., ATEŞ H., SEZERMAN O. U., et al.
1st INTERNATIONAL MULTIDISCIPLINARY CANCER RESEARCH CONGRESS, 18 - 22 Eylül 2019, (Özet Bildiri)
2019
201916. Rationally designed FOXO4-p53 interfering peptide selectively kills chemo-therapy-induced senescent and dormant cancer cells in vivo
Timuçin E., Fischer J. M., Sezerman U., Çınaroğlu S. S.
Ending Age-Related Diseases: Investment Prospects and Advances in Research conference, New-York, Amerika Birleşik Devletleri, 11 - 12 Temmuz 2019, ss.39, (Özet Bildiri)
2019
201917. An Adaptive Phenotypic Shift Leads to TKI Resistance by Acquisition Of Leukemic Stem Cell-Like Properties in CML Cells
YÜCE Z., Baykal Köse S., GÖNÜL GEYİK Ö., Yavuz A. S., AÇIKGÖZ E., ATEŞ H., et al.
2nd İstanbul Immunohematology Summit, 2 - 04 Mayıs 2019, (Özet Bildiri)
2019
201918. Leishmaniasis in Turkey: comparison of the microbiota of the intact skin and lesion site in patients with cutaneous leishmaniasis
KURT Ö., NIELSEN H. V., HARMAN M., ÖZCAN O., ÇAVUŞ İ., ANDERSEN L. O., et al.
29. ECCMID, Amsterdam, Hollanda, 13 - 16 Nisan 2019, (Özet Bildiri)
2019
201919. Irritable bowel syndrome and microbiota: first clinical study on correlationsbetween gut bacteria, Dientamoeba fragilis, Blastocystis and eating habits in Turkey
KURT Ö., Munkhtsetseg B., Stensvold C. R., özcan o., Andersin L. O., ÖKTEM OKULLU S., et al.
29th ECCMID the European Congress of Clinical Microbiology and InfectiousDiseases, Amsterdam, Hollanda, 13 - 16 Nisan 2019, (Özet Bildiri)
2019
201920. FORCED DECISION TREE CLASSIFIER FOR DETERMINING WIDESPREAD ACTING FEATURES AFFECTING MECHANICAL COMPLICATIONS
Seymen N., ORHUN M. Ö., Özmen B. B., YÜCEKUL A., Mannion A., Sezerman O. U., et al.
XIII. Uluslararası Türk Omurga Kongresi, İzmir, Türkiye, 3 - 06 Nisan 2019, ss.121, (Özet Bildiri)
2018
201821. İrritabl Bağırsak Sendromlu Türk Hastalar ile Sağlıklı Kontrollerde Bağırsak Mikrobiyotasının YeniNesil Sekans Analiziyle Karşılaştırılması: Beslenme Alışkanlıkları ve Protozoonların Rolü
KURT Ö., Munkhtsetseg B., Andersin L. O., ÖKTEM OKULLU S., kaya d. e., özcan o., et al.
International XXXVIII. Turkısh Microbiology Congress, Antalya, Türkiye, 4 - 08 Kasım 2018, ss.221-222, (Özet Bildiri)
2018
201822. Endometrial transcriptomic pathways analysis in recurrent miscarriages and unexplained infertility
Demiral I., GÜMÜŞOĞLU ACAR E., Ulgen E., Hosseini M., Ozgor B. Y., Dogan M., et al.
34th Annual Meeting of the European-Society-of-Human-Reproduction-and-Embryology (ESHRE), Barcelona, İspanya, 1 - 04 Haziran 2018, cilt.33, ss.339-340, (Özet Bildiri)
2018
201823. Lipidomic analysis reveals increased TXA2 presence in non-receptive endometrium of recurrent miscarriage and repeated implantation failure patients
Bastu E., Demiral I., Ulgen E., ERKAN M., ÇELİK S. E., AYDIN Y., et al.
34th Annual Meeting of the European-Society-of-Human-Reproduction-and-Embryology (ESHRE), Barcelona, İspanya, 1 - 04 Haziran 2018, cilt.33, ss.337-338, (Özet Bildiri)
2018
201824. Endometrial proteomic signature in recurrent implantation failure
Dogan M., Demiral I., Akgun E., Ulgen E., Gurel B., Sahin B., et al.
34th Annual Meeting of the European-Society-of-Human-Reproduction-and-Embryology (ESHRE), Barcelona, İspanya, 1 - 04 Haziran 2018, cilt.33, ss.116-117, (Özet Bildiri)
2018
201825. Leishmaniasis Patogenezinde Leishmania RNA Virüsü’nün (LRV) Rolü: Ülkemizin İlk LRV () Leishmaniasis Olgusu Bağlamında Klinik Tablo ve Tedavinin İrdelenmesi
KURT Ö., nesteren m., çavuş i., özcan o., BATIR M. B., GÜNDÜZ C., et al.
13. ANTİMİKROBİK KEMOTERAPİ GÜNLERİ, Türkiye, 6 - 08 Nisan 2018, (Özet Bildiri)
2018
201826. Identification of Multiple Sclerosis Related Pathways through Genome-Proteome Correlations
SİVA A., Everest E., Ulgen E., Uygunoglu U., Tutuncu M., Saip S., et al.
ACTRIMS Forum, California, Amerika Birleşik Devletleri, 1 - 03 Şubat 2018, cilt.24, ss.99, (Özet Bildiri)
2017
201727. ENDOMETRIAL GENE EXPRESSION IN PATIENTS WITH RECURRENT IMPLANTATION FAILURE.
Demiral I., Bastu E., Gunel T., Sezerman U., Gumusoglu E., Ulgen E., et al.
73rd Scientific Congress and Expo of the American-Society-for-Reproductive-Medicine (ASRM), San-Antonio, Kuzey Mariana Adaları, 28 Ekim - 01 Kasım 2017, cilt.108, (Özet Bildiri)
2017
201728. RAC1 SIGNALING PATHWAY IS CRUCIAL FOR ETIOLOGY OF REPEATED IMPLANTATION FAILURE (RIF).
Bastu E., Gunel T., Sezerman O. U., Demiral I., Gumusoglu E., Ulgen E., et al.
73rd Scientific Congress and Expo of the American-Society-for-Reproductive-Medicine (ASRM), San-Antonio, Kuzey Mariana Adaları, 28 Ekim - 01 Kasım 2017, cilt.108, (Özet Bildiri)
2017
201729. Identification of Molecular Pathology of Peters’ Anomaly Segregating in a Large Autosomal Dominant Family
KOŞUKCU C., ASLI K., ALANAY Y., KAVAK P., BERKER N., TAŞKIRAN Z. E., et al.
10th International Symposium on Health Informatics and Bioinformatics (HIBIT 2017), KALKANLI, GUZELYURT, Kıbrıs (Kktc), 29 - 30 Haziran 2017, (Tam Metin Bildiri)
2017
201730. Integrated Genomic and Proteomic Analyses of Multiple Sclerosis
EVEREST E., Uygunoğlu U., TÜTÜNCÜ M., SAİP S., SEZERMAN O. U., SİVA A., et al.
American Academy of Neurology 69th Annual Meeting, 22 - 28 Nisan 2017, (Tam Metin Bildiri)
2017
201731. Irritable bowel syndrome and microbiota preliminary study on correlations between gut bacteria, Dientamoeba fragilis, blastocystisi and eating habits
KURT Ö., Munkhtsetseg B., Stensvold C. R., özcan o., Andersin L. O., ÖKTEM OKULLU S., et al.
27th ECCMID, viyena, Avusturya, 22 - 25 Nisan 2017, (Özet Bildiri)
2017
201732. Characterization of the binding pocket of Allatostatin receptor type C of stick insect
DUAN ŞAHBAZ B., SEZERMAN O. U., TORUN H., BİRGÜL İYİSON N.
Glisten Symposium, Porto, Portekiz, 29 - 31 Mart 2017, (Özet Bildiri)
2016
201633. Leukemic cell plasticiy as a resistance mechanism towards tyrosine kinase inhibitors
Baykal S., ATEŞ H., Yavuz A. S., Sezerman U., Acikgoz E., Oktem G., et al.
41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Türkiye, 3 - 08 Eylül 2016, cilt.283, ss.298, (Özet Bildiri)
2015
201534. Bioinformatics challenges and potentialities in studying extreme environments
Angione C., Liò P., Pucciarelli S., Can B., Conway M., Lotti M., et al.
12th International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, CIBB 2015, Naples, İtalya, 10 - 12 Eylül 2015, cilt.9874 LNCS, ss.205-219, (Tam Metin Bildiri)
2016
201635. ZK DrugResist: Automatic extraction of drug resistance mutations and expression level changes from medline abstracts
Khalid Z., SEZERMAN O. U.
7th International Conference on Bioinformatics Models, Methods and Algorithms, BIOINFORMATICS 2016 - Part of 9th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2016, Rome, İtalya, 21 - 23 Şubat 2016, ss.168-173, (Tam Metin Bildiri)
2015
201536. A linkage analysis and a genome-wide association study for multiple sclerosis
EVEREST E., AVŞAR T., SİVA A., UYGUNOĞLU U., TÜTÜNCÜ M., SAİP S., et al.
XIV. Ulusal Tıbbi Biyoloji ve Genetik, Türkiye, 27 - 30 Ekim 2015
2014
201437. Magnesium confers stability to the PYL10 PP2C complex at high temperatures Insights from molecular dynamics simulations
SEZERMAN O. U., TİMUÇİN E., ÇETİN E.
2nd International Symposium on Magnesium in Crop Production, Food Quality and Human Health, Sao-Paulo, Brezilya, 4 - 06 Kasım 2014
2014
201438. Microarray identification of potential novel targets of Ets-domain transcription factor Pea3
Kandemir B., Kayacan Y., Durasi I. M., GÜNGÖR B., Sezerman U., Kurnaz I. A.
FEBS EMBO 2014 Conference, Paris, Fransa, 30 Ağustos - 04 Eylül 2014, cilt.281, ss.280, (Özet Bildiri)
2014
201439. Zinc induces self assembly of thermoalkalophilic lipases A strategy for thermostability
TİMUÇİN E., SEZERMAN O. U.
The 28th Annual Symposium of Protein Society, San Diego, CA, Amerika Birleşik Devletleri, 27 - 30 Temmuz 2014
2014
201440. Zinc Induces Self-Assembly Of Bacterial Thermoalkalophilic Lipases: A Strategy For Thermostability
Timucin E., Sezerman O. U.
28th Annual Symposium of the Protein-Society, California, Amerika Birleşik Devletleri, 27 - 30 Temmuz 2014, cilt.23, ss.134, (Özet Bildiri)
2013
201341. A genetic algorithm approach to active subnetwork search applied to GWAS data
Özşik O., Bakir-Güngör B., DİRİ B., Sezerman O. U.
2013 8th International Symposium on Health Informatics and Bioinformatics, HIBIT 2013, Ankara, Türkiye, 25 - 27 Eylül 2013, (Tam Metin Bildiri)
2013
201342. Classification of cohesin family using class specific motifs
Eser E. M., ARSLAN R. B., Sezerman U. O.
2013 8th International Symposium on Health Informatics and Bioinformatics, HIBIT 2013, Ankara, Türkiye, 25 - 27 Eylül 2013, (Tam Metin Bildiri)
2012
201243. The Identification of Pathway Markers in Behcet’xxs Disease Using Genomewide Association Data From Two Different Populations.
GÜNGÖR B., GÜL A., SEZERMAN O. U.
ARTHRITIS AND RHEUMATISM, Washington, Kiribati, 9 - 14 Kasım 2012, cilt.64, ss.434-435, (Özet Bildiri)
2012
201244. The Identification of Pathway Markers in Behcet's Disease Using Genomewide Association Data From Two Different Populations.
Bakir-Gungor B., Remmers E., Kastner D. L., Meguro A., Mizuki N., GÜL A., et al.
Annual Scientific Meeting of the American-College-of-Rheumatology (ACR) and Association-of-Rheumatology-Health-Professionals (ARHP), Washington, Kiribati, 9 - 14 Kasım 2012, cilt.64, (Özet Bildiri)
2012
201245. Integration of GWAS and microarray data to understand the disease mechanism
Yurdalan G., Ünlü E., Yüce Y., BakirGüngor B., Sezerman U.
2012 7th International Symposium on Health Informatics and Bioinformatics, HIBIT 2012, Cappadocia, Türkiye, 19 - 22 Nisan 2012, ss.95-100, (Tam Metin Bildiri)
2012
201246. Modifying the chain length selectivity of Bacillus thermocatenulatus lipase through computational models of the enzyme substrate complex
TİMUÇİN E., KUYUCAK S., SEZERMAN O. U.
İstanbul İstatistiksel Fizik Günleri, 28 - 30 Haziran 2012
2012
201247. Representation of Protein Secondary Structure Using Bond-Orientational Order Parameters
Meydan C., Sezerman O. U.
7th International-Association-for-Pattern-Recognition (IAPR) International Conference on Pattern Recognition in Bioinformatics (PRIB), Tokyo, Japonya, 8 - 10 Kasım 2012, cilt.7632, ss.188-197, (Tam Metin Bildiri)
2012
201248. Pattern Recognition for Subfamily Level Classification of GPCRs Using Motif Distillation and Distinguishing Power Evaluation
Yavuz A. S., Ozer B., Sezerman O. U.
7th International-Association-for-Pattern-Recognition (IAPR) International Conference on Pattern Recognition in Bioinformatics (PRIB), Tokyo, Japonya, 8 - 10 Kasım 2012, cilt.7632, ss.267-276, (Tam Metin Bildiri)
2011
201149. Modification of Media pH Significantly Improves Recombinant Protein Stabilityin Pichia pastoris
GÜL Ö., TİMUÇİN E., SEZERMAN O. U.
The International Conference on Enzyme Science and Technology, Muğla, Türkiye, 31 Ekim - 04 Kasım 2011
2011
201150. Computational Models for Chain Length Selectivity of Bacillus thermocatenulatus lipase
TİMUÇİN E., KUYUCAK S., SEZERMAN O. U.
The International Conference on Enzyme Science and Technology, Muğla, Türkiye, 31 Ekim - 04 Kasım 2011
2011
201151. Cloning of Hordeum spontenaum genes which are expressed upon zinc deficiency using suppressed sub-stractive hybridization method
VURAL KORKUT Ş., Altinisik B. C., Sezerman O. U., Meydan C.
European Biotechnology Congress, İstanbul, Türkiye, 28 Eylül - 01 Ekim 2011, cilt.22, (Özet Bildiri)
2011
201152. IDENTIFICATION OF TRANSCRIPTION FACTOR BINDING SITES IN PROMOTER DATABASES
Durast I. M., Dag U., Gungor B. B., Erdogan B., Kurnaz I. A., Sezerman O. U.
6th International Symposium on Health Informatics and Bioinformatics (HIBIT), İzmir, Türkiye, 2 - 05 Mayıs 2011, ss.68-73, (Tam Metin Bildiri)
2010
201053. Physico-chemical properties of DNA in phylogeny construction
Bakiş Y., Ǔur Sezerman O. U., Otu H. H.
2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010, Antalya, Türkiye, 20 - 22 Nisan 2010, ss.27-30, (Tam Metin Bildiri)
2010
201054. SUMOtr: SUMOylation site prediction based on 3D structure and hydrophobicity
Yavuz A. S., Sezerman U.
2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010, Antalya, Türkiye, 20 - 22 Nisan 2010, ss.93-97, (Tam Metin Bildiri)
2010
201055. Multiple sequence alignment based on structural properties
Ozer B., Gezici G., Meydan C., Sezerman U.
2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010, Antalya, Türkiye, 20 - 22 Nisan 2010, ss.39-44, (Tam Metin Bildiri)
2010
201056. Determinig the ligand-specific regions of peptide-binding G-Protein Coupled Receptors
Cobanoglu M. C., Sezerman U., Karabulut N. P.
2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010, Antalya, Türkiye, 20 - 22 Nisan 2010, ss.211-213, (Tam Metin Bildiri)
2010
201057. Predict permissive sites of protein for insertion domain
Türk A., Sezerman O. U.
2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010, Antalya, Türkiye, 20 - 22 Nisan 2010, ss.133-136, (Tam Metin Bildiri)
2010
201058. High throughput protein expression in Pichia pastoris using a non repressing carbon source
GÜL Ö., TİMUÇİN E., YENİLMEZ B., SEZERMAN O. U.
The Protein Istanbul (PROTIST), İstanbul, Türkiye, 23 - 25 Nisan 2010
2009
200959. From in silico to in vitro Modelling and production of Trichoderma reesei endoglucanase 1 mutants in Pichia pastoris for textile biofinishing
BAYRAM AKÇAPINAR G., GÜL Ö., SEZERMAN O. U.
III International Conference on Environmental, Industrial and Applied Microbiology “ (BioMicroWorld2009), Lizbon, Portekiz, 2 - 04 Aralık 2009
2009
200960. Prediction Of Peptides Binding To MHC Class I Alleles By Partial Periodic Pattern Mining
Meydan C., Sezerman U., Otu H.
International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing, Shanghai, Çin, 3 - 05 Ağustos 2009, ss.315-316, (Tam Metin Bildiri)
2009
200961. An entropy based heuristic model for predicting functional sub-type divisions of protein families
Yorukoglu D., Bakis Y., Sezerman U.
11th Annual Genetic and Evolutionary Computation Conference, GECCO-2009, Montreal, Kanada, 8 - 12 Temmuz 2009, cilt.2009-January, ss.2173-2177, (Tam Metin Bildiri)
2009
200962. Optimization of morphological data in numerical taxonomy analysis using genetic algorithms feature selection method
Bakiş Y., Sezerman O. U., Babaç M. T., Meydan C.
11th Annual Genetic and Evolutionary Computation Conference, GECCO-2009, Montreal, Kanada, 8 - 12 Temmuz 2009, cilt.2009-January, ss.1967-1970, (Tam Metin Bildiri)
2008
200863. Discrimination of native folds using network properties of protein structures
Küçükural A., Sezerman O. U., Erçil A.
6th Asia-Pacific Bioinformatics Conference, APBC 2008, Kyoto, Japonya, 14 - 17 Ocak 2008, cilt.6, ss.59-68, (Tam Metin Bildiri)
2008
200864. DockPro: A VR-based tool for protein-protein docking problem
Cakici S., Sumengen S., Sezerman U., Balcisoy S.
7th ACM SIGGRAPH International Conference on Virtual-Reality Continuum and Its Applications in Industry, VRCAI 2008, Singapore, Singapur, 8 - 09 Aralık 2008, (Tam Metin Bildiri)
2008
200865. Cloning of T reesei Cellulase Components in P pastoris and Impact of Loop Mutations on EGI of T reesei
BAYRAM AKÇAPINAR G., GÜL Ö., SEZERMAN O. U.
International Enzyme Engineering Symposium (IEES’08), Aydın, Türkiye, 1 - 05 Ekim 2008
2008
200866. Discovery of Biomarkers for Hexachlorobenzene Toxicity Using Population Based Methods on Gene Expression Data
Meydan C., Kuecuekural A., Yoeruekoglu D., Sezerman O. U.
3rd IAPR International Conference on Pattern Recognition in Bioinformatics, Melbourne, Avustralya, 15 - 17 Ekim 2008, cilt.5265, ss.412-423, (Tam Metin Bildiri)
2008
200867. Biosensors for the detection of cardiovascular risk markers in human serum
Gul O., Kallempudi S. S., Basaga H., Sezennan U., Gurbuz Y.
Conference on PhD Research in Microelectronics and Electronics, İstanbul, Türkiye, 22 - 25 Haziran 2008, ss.25-28, (Tam Metin Bildiri)
2007
200768. Impact of mutations on thermal stability of T reesei EGII a computational study
BAYRAM AKÇAPINAR G., Sezerman A. Ö., SEZERMAN O. U.
13th European Congress on Biotechnology (Symbiosis), Barcelona, İspanya, 16 - 19 Eylül 2007, cilt.131, ss.259-260
2007
200769. Purification characterization and modeling of recombinant Goalpha protein
MEGA TİBER P., NACAR C., ORUN O., SEZERMAN O. U., KAN B.
Gordon Research Conferences, Phosphorylation & G-Protein Mediated Signaling Networks, 10 - 15 Haziran 2007
2007
200770. Comparison of different feature extraction methods on classification of gene expression data
Argunash A. O., Akan B., Ercil A., Sezerman U.
IEEE 15th Signal Processing and Communications Applications Conference, Eskişehir, Türkiye, 11 - 13 Haziran 2007, ss.921-923, (Tam Metin Bildiri)
2007
200771. Evolutionary Selection of Minimum Number of Features for Classification of Gene Expression Data Using Genetic Algorithms
Kucukural A., Yeniterzi R., Yeniterzi S., Sezerman O. U.
Annual Conference of Genetic and Evolutionary Computation Conference, London, Kanada, 7 - 11 Temmuz 2007, ss.401-406, (Tam Metin Bildiri)
2006
200672. Functional classification of G-protein coupled receptors, based on their specific ligand coupling patterns
Bakir B., Sezerman O. U.
EvoWorkshops 2006: EvoBIO, EvoCOMNET, EvoHOT, EvoIASP, EvoINTERACTION, EvoMUSART, and EvoSTOC, Budapest, Macaristan, 10 - 12 Nisan 2006, cilt.3907 LNCS, ss.1-12, (Tam Metin Bildiri)
2006
200673. MHC class 1 peptide motif determination using a novel association rule mining method
Kucukural A., Yardimci G. G., Sezerman O. U.
31st Congress of the Federation-of-European-Biochemical-Societies (FEBS), İstanbul, Türkiye, 24 - 29 Haziran 2006, cilt.273, ss.252, (Özet Bildiri)
2006
200674. Ligand-specific classification of G protein-coupled receptors using support vector machines and reduced alphabeth
Sezerman O. U., Akalin A., Kasapl Z., Kavak E.
31st Congress of the Federation-of-European-Biochemical-Societies (FEBS), İstanbul, Türkiye, 24 - 29 Haziran 2006, cilt.273, ss.63, (Özet Bildiri)
2006
200675. Modified association rule mining approach for the MHC-peptide binding problem
Yardimci G. G., Kucukural A., Saygin Y., Sezerman U.
21st International Symposium on Computer and Information Sciences (ISCIS 2006), İstanbul, Türkiye, 1 - 03 Kasım 2006, cilt.4263, ss.165-167, (Tam Metin Bildiri)
2006
200676. Prediction and classification for GPCR sequences based on ligand specific features
Erguner B., Erdogan O., Sezerman U.
21st International Symposium on Computer and Information Sciences (ISCIS 2006), İstanbul, Türkiye, 1 - 03 Kasım 2006, cilt.4263, ss.174-175, (Tam Metin Bildiri)
2005
200577. Immobilized Glucose Oxidase GOD for better stability and reuse in biobleaching of textiles
BAYRAM AKÇAPINAR G., DAVULCU A., SEZERMAN A. Ö., Taralp A., SEZERMAN O. U., ANİŞ P., et al.
7th International Symposium on Biocatalysis and Biotransformations (BIOTRANS 2005), Delft, Hollanda, 3 - 08 Temmuz 2005
2005
200578. Immobilized Glucose Oxsidase for Better Stability and Reuse in Biobleaching of Textiles
GÜNSELİ A., DAVULCU A., SEZERMAN O. U., TARALP A., ANİŞ P., EREN H. A., et al.
7th International Symposium on Biocatalysis and biotransformations, Delf, Hollanda, 3 - 08 Temmuz 2005, ss.75
2005
200579. Use of cellulase jeffamine networks in place of the free enzyme may alleviate the problem of lost fiber strength during textile processing
BAYRAM AKÇAPINAR G., Duran K., Körlü Ekmekçi A., BAHTİYARİ M. İ., Taralp A., SEZERMAN O. U.
229th National Meeting of the American-Chemical-Society, San Diego, Amerika Birleşik Devletleri, 13 - 17 Mart 2005
2005
200580. Biosensor implementation for cardiovascular risk marker analysis
Gul O., Inceturkmen E., Kutuk O., Basaga H., Sezerman U., Gurbuz Y.
4th IEEE Conference on Sensors, Irvine, İngiltere, 31 Ekim - 03 Kasım 2005, ss.303-305, (Tam Metin Bildiri)
2004
200481. Protein Structural Class Determination Using Support Vector Machines
IŞIK Z., YANIKOĞLU YEŞİLYURT A. B., SEZERMAN O. U.
19th International Symposium on Computer and Information Sciences, 27 - 29 Ekim 2004, (Tam Metin Bildiri)
2004
200482. Treatment of viscose with crosslinked commercial cellulases
BAYRAM AKÇAPINAR G., Duran K., BAHTİYARİ M. İ., Körlü Ekmekçi A., Taralp A., SEZERMAN O. U.
3rd International Conference on Textile Biotechnology (INTB04), Graz, Avusturya, 13 - 16 Haziran 2004
2003
200383. Effect of feature extraction and feature selection on expression data from epithelial ovarian cancer
Turkeli Y., Ercil A., Sezerman O. U.
25th Annual International Conference of the IEEE-Engineering-in-Medicine-and-Biology-Society, Cancun, Meksika, 17 - 21 Eylül 2003, cilt.25, ss.3559-3562, (Tam Metin Bildiri)
2001
200184. Three dimensional representation of amino acid characteristics
Sezerman O. U., Islamaj R., Alpaydin E.
23rd Annual International Conference of the IEEE-Engineering-in-Medicine-and-Biology-Society, İstanbul, Türkiye, 25 - 28 Ekim 2001, cilt.23, ss.2903-2906, (Tam Metin Bildiri)
1992
199285. PROBLEMS AND PROGRESS IN COMPUTATIONAL APPROACHES TO THE MOLECULAR-BASIS OF RECOGNITION
DELISI C., SEZERMAN U., ROSENFELD R.
25TH JERUSALEM SYMP ON QUANTUM CHEMISTRY AND BIOCHEMISTRY, JERUSALEM, İsrail, 18 - 21 Mayıs 1992, cilt.25, ss.443-447, (Tam Metin Bildiri)
Kitaplar
2024
20241. Mikrobiyom Analizi
Sezerman O. U.
Mikrobiyotanın İnsan Sağlığı Üzerine Etkileri, Mustafa Oral Öncül,Zerrin Aktaş, Editör, Istanbul University, İstanbul, ss.247-289, 2024
2023
20232. Mikrobiyom Analizi
Sezerman O. U.
Mikrobiyota, Probiyotikler ve Akılcı Beslenme, Mustafa altındiş, Editör, Nobel Yayın Dağıtım, İstanbul, ss.527-535, 2023
2019
20193. Bioinformatics Tools for Detection and Clinical Interpretation of Genomic Variations
SEZERMAN O. U.
Methods in Molecular Medicine, Ali Samadikuchaksaraei, Morteza Seifi, Editör, intechopen, ss.15-32, 2019
2016
20164. Systems Biological Applications for Fungal Gene Expression
SEZERMAN O. U., BAYRAM AKÇAPINAR G.
Gene Expression Systems in Fungi: Advancements and Applications, Monika Schmoll, Christoph Dattenböck, Editör, Springer Link, Berlin, ss.385-393, 2016
2016
20165. Molecular Modeling and Its Applications in Protein Engineering
SEZERMAN O. U., TİMUÇİN E.
Synthetic Biology, Anton Glieder Christian P. Kubicek, Diethard Mattanovich, Birgit Wiltschi, Michael Sauer, Editör, Springer Link, Berlin, ss.281-306, 2016
Desteklenen Projeler
Devam Ediyor
Devam EdiyorÜçlü Negatif Lokal Ileri Meme Kanserinde Neoadjuvan Tedavi Sonrası Yanıt Ile Ilişkili Moleküler Yolakların Araştırılması Ve Skorlama Sistemi Geliştirilmesi
TÜBİTAK Projesi , 1001 - Bilimsel ve Teknolojik Araştırma Projelerini Destekleme Programı
SEZERMAN O. U. (Yürütücü)
Devam Ediyor
Devam EdiyorBiyolojik Ve Bilgisayar Ağı Anomalilerinin Etkilerinin Incelenmesi Için Skorlama Sistemi Geliştirilmesi
TÜBİTAK Projesi , 1001 - Bilimsel ve Teknolojik Araştırma Projelerini Destekleme Programı
SEZERMAN O. U. (Yürütücü)
2019 - 2026
2019 - 2026Kişisel Tıp Uygulamaları İçin Bulut Tabanlı Veri Analiz Algoritmaları ve Platformu Geliştirilmesi
TÜBİTAK Projesi , 2244 - TÜBİTAK Sanayi Doktora Programı Projesi
SEZERMAN O. U. (Yürütücü)
2024 - 2025
2024 - 2025Safra Kesesi Taşı Bulunan ve Bulunmayan Hastalar Arasındaki Mikrobiyom Farklılıkların Belirlenmesi ve Safra Kesesi Taşı Oluşumuna Etki Eden Biyomarkerların Tespit Edilmesi
Yükseköğretim Kurumları Destekli Proje , BAP Araştırma Projesi
YAPALI S. (Yürütücü), KARA V., İşgördü Ö. H., Karaman T., AYGÜN C., TÖZÜN A. N., et al.
2021 - 2024
2021 - 2024
Yaşlanma ve Kanser Direncine Sahip Kör Farelerde Hücresel Strese Karşı Geliştirilen Moleküler veEpigenetik Mekanizmaların 3 Boyutlu Organoid Kültürlerinde Araştırılması
TÜBİTAK Projesi , 3501 - Ulusal Genç Araştırmacı Kariyer Geliştirme Programı
(Proje Özeti)
Bozaykut Eker P. (Yürütücü), Çolak F., Beyaz S., Sezerman O. U.
2022 - 2023
2022 - 2023LAMP Tabanlı Tükürükten SMA Tarama Kiti Geliştirilmesi
Türkiye Sağlık Enstitüleri Başkanlığı (TÜSEB) Araştırma Projesi
Sezerman O. U. (Yürütücü)
2020 - 2023
2020 - 2023Akciğer Kanseri Tanısı Almış Ve Şüpheli Hasta Gruplarının Ardışık Tükrük Ve Gaita Örneklerinde Karşılaştırılmalı Mikrobiyota Ve Lipidomik Analizler
TÜBİTAK Uluslararası İkili İşbirliği Projesi , 2523 - Kore Ulusal Araştırma Vakfı (NRF) İkili İşbirliği Programı
Sezerman O. U.
2020 - 2023
2020 - 2023Türkiye?deki Primer Siliyer Diskinezi (PSD) hastaları için tanı metotlarının gelistirilmesi veuygun gen panellerinin olusturulması
TÜBİTAK Projesi , 1001 - Bilimsel ve Teknolojik Araştırma Projelerini Destekleme Programı
(Proje Özeti)
SEZERMAN O. U. (Yürütücü)
2020 - 2023
2020 - 2023Deciphering and Targeting Neural Invasion in Pancreatic Cancer
TÜBİTAK Projesi , 2223 - Yurt İçi Bilimsel Etkinlikleri Destekleme Programı
Sever E., Sezerman O. U., Kocagöz Z. T., Demir E., İnce Ü., Ceyhan G. O. (Yürütücü)
2019 - 2023
2019 - 2023Avrupa Nadir Hastalıklar Araştırma Programı
AB Çerçeve Programları Destekli Proje , H2020 Araştırma Altyapı Projeleri
(Proje Özeti)
Özbek U., Alanay Y., Sezerman O. U., Julkowska D.(Yürütücü)
2021 - 2022
2021 - 2022Çeşitli Candida Türlerinin Hızlı Tespiti İçin Tanı Kiti Oluşturma
KOSGEB
(Proje Özeti)
Sezerman O. U.
2020 - 2022
2020 - 2022Türkiye'deki Primer Siliyer Diskinezi (PSD) Hastaları için Tanı Metotlarının Geliştirilmesi ve Uygun Gen Panellerinin Oluşturulması
TÜBİTAK Projesi , 1003 - Öncelikli Alanlar Ar-Ge Projeleri Destekleme Programı
Kaya Ö. T., Sezerman O. U. (Yürütücü), Şirvancı S., Karahüseyinoğlu S., Ata P.
2019 - 2022
2019 - 2022EJP RD
UFUK 2020 Projesi , ERC, Avrupa Araştırma Konseyi Destekli Proje
SEZERMAN O. U. (Yürütücü)
2021 - 2021
2021 - 2021
Yaşlanma ve kanser direncine sahip kör farelerde hücresel strese karşı geliştirilen moleküler ve epigenetik mekanizmaların hücre kültürü ve 3 boyutlu organoid kültürlerinde araştırılması
TÜBİTAK Projesi , 3501 - Ulusal Genç Araştırmacı Kariyer Geliştirme Programı
BOZAYKUT EKER P.(Yürütücü), Beyaz S., Çolak F., SEZERMAN O. U.
2021 - 2021
2021 - 2021IMPECABL
UFUK 2020 Projesi , H2020 Diğer Kariyer Geliştirme Projeleri
(Proje Özeti)
SEZERMAN O. U. (Yürütücü)
2021 - 2021
2021 - 2021Diagnostic platform for early, reliable and rapid detection of coronaviruses (STRIVE)
AB Destekli Diğer Projeler
(Proje Özeti)
SEZERMAN O. U. (Yürütücü)
2021 - 2021
2021 - 2021The Menopause Vulnerability Fingerprint: towards personalising the menopause interventions inthe daily life MAUVE
UFUK 2020 Projesi , H2020 Diğer Kariyer Geliştirme Projeleri
(Proje Özeti)
SEZERMAN O. U. (Yürütücü)
2021 - 2021
2021 - 2021Türkiye?de SARS-cov 2 tüm genom dizilerinin elde edimi ve bunları hızlı, hassas bir sekilde tanımak için LAMP tabanlı kit tasarımı
TÜBİTAK Projesi , 1001 - Bilimsel ve Teknolojik Araştırma Projelerini Destekleme Programı
(Proje Özeti)
SEZERMAN O. U. (Yürütücü)
2017 - 2020
2017 - 2020
Üçlü Negatif Lokal Ileri Meme Kanserinde Neoadjuvan Tedaviye Yanıtın Matematiksel Modeller Ve Hayvan Deneyleriyle Tespit Edilmesi
TÜBİTAK Projesi , 1001 - Bilimsel ve Teknolojik Araştırma Projelerini Destekleme Programı
SEZERMAN O. U. (Yürütücü)
2016 - 2019
2016 - 2019Bacillus Thermocatenulatus Lipazının (Btl2) Endüstriyel Uygulamalarda Kullanmak Üzere Protein Mühendisliği Yöntemleri ile Organik Çözücüler İçerisinde Daha İyi Çalışır Hale Gelmesinin Sağlanması
Diğer Uluslararası Fon Programları
SEZERMAN O. U. (Yürütücü)
2016 - 2019
2016 - 2019In vitro ve In siliko yontemlerin kombinasyonuyla hedeflendirilmis anti kanser ilaci gonderilmesi icin peptid tasarimi
Diğer Uluslararası Fon Programları
SEZERMAN O. U. (Yürütücü)
2015 - 2018
2015 - 2018Kolon Kanseri Etiyolojisindeki Epigenetik Ve Diğer Faktörler Ile Bu Faktörlerin Hedeflediği Önemli Yolakların Belirlenmesi
Diğer Uluslararası Fon Programları
SEZERMAN O. U. (Yürütücü)
2013 - 2015
2013 - 2015DNA Karma Yöntemi İle Endüstriyel Uygulamalar İçin Farklı Lipaz Ve Selülaz Veritabanı Ve Kütüphanesinin Oluşturulması
Diğer Uluslararası Fon Programları
SEZERMAN O. U. (Yürütücü)
2010 - 2013
2010 - 2013Investigation of the IL-7 Cytokine Receptor (IL-7R) Gene Control Mechanism
TÜBİTAK Projesi , 1001 - Bilimsel ve Teknolojik Araştırma Projelerini Destekleme Programı
Erman M. B. (Yürütücü), Sezerman O. U.