Yayınlar & Eserler

SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler

HriGFP Novel Flourescent Protein: Expression and Applications

Saeed S., Mehreen H., Gerlevik U., Tariq A., Manzoor S., Noreen Z., et al.
MOLECULAR BIOTECHNOLOGY, cilt.62, ss.280-288, 2020 (SCI İndekslerine Giren Dergi) identifier identifier identifier

A comprehensive study on identifying the structural and functional SNPs of human neuronal membrane glycoprotein M6A (GPM6A)

Khalid Z., SEZERMAN O. U.
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2020 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Comparison of endometrial prostanoid profiles in three infertile subgroups: the missing part of receptivity?

Keles I. D. , Ulgen E., Erkan M. B. , ÇELİK S. E. , Aydin Y., ÖNEM A. N. , et al.
FERTILITY AND STERILITY, cilt.113, ss.670-679, 2020 (SCI İndekslerine Giren Dergi) identifier identifier identifier

pathfindR: An R Package for Comprehensive Identification of Enriched Pathways in Omics Data Through Active Subnetworks.

Ulgen E., Ozisik O., Sezerman O. U.
Frontiers in genetics, cilt.10, ss.858, 2019 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Investigation of base excision repair gene variants in late-onset Alzheimer's disease.

Ertuzun T., Semerci A., Cakir M. E. , EKMEKÇİOĞLU A. , Gok M. O. , Soltys D. T. , et al.
PloS one, cilt.14, 2019 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Potential Marker Pathways in the Endometrium That May Cause Recurrent Implantation Failure.

Bastu E., Demiral I., Gunel T., Ulgen E., Gumusoglu E., Hosseini M. K. , et al.
Reproductive sciences (Thousand Oaks, Calif.), cilt.26, ss.879-890, 2019 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Whole exome sequencing-based analysis to identify DNA damage repair deficiency as a major contributor to gliomagenesis in adult diffuse gliomas.

Ülgen E., Can Ö., Bilguvar K., Oktay Y., Akyerli C. , Danyeli A. , et al.
Journal of neurosurgery, ss.1-12, 2019 (SCI Expanded İndekslerine Giren Dergi) identifier identifier

Comparison of Dendritic Cell Activation by Virus-Based Vaccine Delivery Vectors Emphasizes the Transcriptional Downregulation of the Oxidative Phosphorylation Pathway

Tsitoura E., Kazazi D., Oz-Arslan D. , Sever E. A. , Khalili S., Vassilaki N., et al.
HUMAN GENE THERAPY, cilt.30, ss.429-445, 2019 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Identification of epilepsy related pathways using genome-wide DNA methylation measures: A trio-based approach

Ozdemir O., Egemen E., Iseri S. A. U. , SEZERMAN O. U. , Bebek N., Baykan B., et al.
PLOS ONE, cilt.14, 2019 (SCI İndekslerine Giren Dergi) identifier identifier identifier

A possible founder mutation in FZD6 gene in a Turkish family with autosomal recessive nail dysplasia.

Saygi C., ALANAY Y. , Sezerman U. , Yenenler A., Ozoren N.
BMC medical genetics, cilt.20, ss.15, 2019 (SCI İndekslerine Giren Dergi) identifier identifier identifier

First Report and In Silico Analysis of Leishmania virus (LRV2) identified in an autochthonous Leishmania major isolate in Turkey.

Kurt Ö. , Mansur N., Çavuş İ., Özcan O., Batir M., Gündüz C., et al.
The new microbiologica, cilt.42, ss.64-67, 2019 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Computational drug repurposing to predict approved and novel drug-disease associations.

Khalid Z., Sezerman O. U.
Journal of molecular graphics & modelling, cilt.85, ss.91-96, 2018 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Ameliorative potential of Lavandula stoechas in metabolic syndrome via multitarget interactions.

Kulabas S., Ipek H., Tufekci A., Arslan S., Demirtas I., Ekren R., et al.
Journal of ethnopharmacology, cilt.223, ss.88-98, 2018 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Investigating the structural properties of the active conformation BTL2 of a lipase from Geobacillus thermocatenulatus in toluene using molecular dynamic simulations and engineering BTL2 via in-silico mutation.

Yenenler A., Venturini A., Burduroglu H., Sezerman O. U.
Journal of molecular modeling, cilt.24, ss.229, 2018 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Prediction of HIV Drug Resistance by Combining Sequence and Structural Properties.

Khalid Z., Sezerman O. U.
IEEE/ACM transactions on computational biology and bioinformatics, cilt.15, ss.966-973, 2018 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health.

Holub P., Kohlmayer F., Prasser F., Mayrhofer M. T. , Schluender I., Martin G. M. , et al.
Biopreservation and biobanking, cilt.16, ss.97-105, 2018 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Thermostability of the PYL-PP2C Heterodimer Is Dependent on Magnesium: In Silico Insights into the Link between Heat Stress Response and Magnesium Deficiency in Plants.

Timucin E. , Sezerman O. U.
Journal of chemical information and modeling, cilt.58, ss.661-672, 2018 (SCI İndekslerine Giren Dergi) identifier identifier identifier

ZK DrugResist 2.0: A TextMiner to extract semantic relations of drug resistance from PubMed.

Khalid Z., Sezerman O. U.
Journal of biomedical informatics, cilt.69, ss.93-98, 2017 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Computational approaches for <i>de novo</i> design and redesign of metal-binding sites on proteins.

Akcapinar G. , Sezerman O. U.
Bioscience reports, cilt.37, 2017 (SCI İndekslerine Giren Dergi) identifier identifier identifier

An integrative study on the impact of highly differentially methylated genes on expression and cancer etiology.

Ozer B., Sezerman U.
PloS one, cilt.12, 2017 (SCI İndekslerine Giren Dergi) identifier identifier identifier

In silico analyses and global transcriptional profiling reveal novel putative targets for Pea3 transcription factor related to its function in neurons.

KANDEMİR B., Dag U., Gungor B. B. , Durasi I. M. , Erdogan B., Sahin E., et al.
PloS one, cilt.12, 2017 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Analysis of the interplay between methylation and expression reveals its potential role in cancer aetiology.

Ozer B., Sezerman U.
Functional & integrative genomics, cilt.17, ss.53-68, 2017 (SCI İndekslerine Giren Dergi) identifier identifier identifier

Diğer Dergilerde Yayınlanan Makaleler

Differential gene expression analysis of human cumulus cells.

Demiray S., Goker E., Tavmergen E., Yilmaz O., Calimlioglu N., Soykam H., et al.
Clinical and experimental reproductive medicine, cilt.46, ss.76-86, 2019 (ESCI İndekslerine Giren Dergi) Creative Commons License identifier identifier identifier

Expression of the Bone Morphogenetic Protein-2 (BMP2) in the Human Cumulus Cells as a Biomarker of Oocytes and Embryo Quality.

Demiray S., Yilmaz O., Goker E., Tavmergen E., Calimlioglu N., Sezerman U. , et al.
Journal of human reproductive sciences, cilt.10, ss.194-200, 2017 (Diğer Kurumların Hakemli Dergileri) identifier identifier

A Multiplex-Urease PCR Assay for Detection of Helicobacter pylori Infection Directly from Gastric Biopsy Specimens and Comparison of Multiplex- Urease PCR Results with Rapid Urease Test and Histopathology

ÖKTEM OKULLU S. , TİFTİKÇİ A. , SARUÇ M. , ÇİÇEK B. , VARDARELİ N. E. , TÖZÜN A. N. , et al.
Clinical Microbiology: Open Access, cilt.6, 2017 (Diğer Kurumların Hakemli Dergileri)

Systems Biological Applications for Fungal Gene Expression

Akcapinar G. , SEZERMAN O. U.
GENE EXPRESSION SYSTEMS IN FUNGI: ADVANCEMENTS AND APPLICATIONS, ss.385-393, 2016 (Diğer Kurumların Hakemli Dergileri) identifier

Hakemli Kongre / Sempozyum Bildiri Kitaplarında Yer Alan Yayınlar

Magnesium confers stability to the PYL10 PP2C complex at high temperatures Insights from molecular dynamics simulations

SEZERMAN O. U. , TİMUÇİN E. , ÇETİN E.
2nd International Symposium on Magnesium in Crop Production, Food Quality and Human Health, Sao-Paulo, Brezilya, 4 - 06 November 2014

Zinc induces self assembly of thermoalkalophilic lipases A strategy for thermostability

TİMUÇİN E. , SEZERMAN O. U.
The 28th Annual Symposium of Protein Society, San Diego, CA, Amerika Birleşik Devletleri, 27 - 30 July 2014

Modifying the chain length selectivity of Bacillus thermocatenulatus lipase through computational models of the enzyme substrate complex

TİMUÇİN E. , KUYUCAK S., SEZERMAN O. U.
İstanbul İstatistiksel Fizik Günleri, 28 - 30 June 2012

Computational Models for Chain Length Selectivity of Bacillus thermocatenulatus lipase

TİMUÇİN E. , KUYUCAK S., SEZERMAN O. U.
The International Conference on Enzyme Science and Technology, Muğla, Türkiye, 31 October - 04 November 2011

Modification of Media pH Significantly Improves Recombinant Protein Stabilityin Pichia pastoris

GÜL Ö., TİMUÇİN E. , SEZERMAN O. U.
The International Conference on Enzyme Science and Technology, Muğla, Türkiye, 31 October - 04 November 2011

High throughput protein expression in Pichia pastoris using a non repressing carbon source

GÜL Ö., TİMUÇİN E. , YENİLMEZ B., SEZERMAN O. U.
The Protein Istanbul (PROTIST), İstanbul, Türkiye, 23 - 25 April 2010

From in silico to in vitro Modelling and production of Trichoderma reesei endoglucanase 1 mutants in Pichia pastoris for textile biofinishing

BAYRAM AKÇAPINAR G. , GÜL Ö., SEZERMAN O. U.
III International Conference on Environmental, Industrial and Applied Microbiology “ (BioMicroWorld2009), Lizbon, Portekiz, 2 - 04 December 2009

Cloning of T reesei Cellulase Components in P pastoris and Impact of Loop Mutations on EGI of T reesei

BAYRAM AKÇAPINAR G. , GÜL Ö., SEZERMAN O. U.
International Enzyme Engineering Symposium (IEES’08), Aydın, Türkiye, 1 - 05 October 2008

Impact of mutations on thermal stability of T reesei EGII a computational study

BAYRAM AKÇAPINAR G. , Sezerman A. Ö. , SEZERMAN O. U.
13th European Congress on Biotechnology (Symbiosis), Barcelona, İspanya, 16 - 19 September 2007, cilt.131, ss.259-260

Immobilized Glucose Oxidase GOD for better stability and reuse in biobleaching of textiles

BAYRAM AKÇAPINAR G. , DAVULCU A., SEZERMAN A. Ö. , Taralp A., SEZERMAN O. U. , ANİŞ P., et al.
7th International Symposium on Biocatalysis and Biotransformations (BIOTRANS 2005), Delft, Hollanda, 3 - 08 July 2005

Use of cellulase jeffamine networks in place of the free enzyme may alleviate the problem of lost fiber strength during textile processing

BAYRAM AKÇAPINAR G. , Duran K., Körlü Ekmekçi A., BAHTİYARİ M. İ. , Taralp A., SEZERMAN O. U.
229th National Meeting of the American-Chemical-Society, San Diego, Amerika Birleşik Devletleri, 13 - 17 March 2005

Treatment of viscose with crosslinked commercial cellulases

BAYRAM AKÇAPINAR G. , Duran K., BAHTİYARİ M. İ. , Körlü Ekmekçi A., Taralp A., SEZERMAN O. U.
3rd International Conference on Textile Biotechnology (INTB04), Graz, Avusturya, 13 - 16 June 2004