SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler
Multilocus pathogenic variants contribute to intrafamilial clinical heterogeneity: a retrospective study of sibling pairs with neurodevelopmental disorders
BMC MEDICAL GENOMICS
, cilt.17, sa.1, 2024 (SCI-Expanded)





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Proteomics profiling and machine learning in nusinersen-treated patients with spinal muscular atrophy
A microdeletion event at 19q13.43 in IDH-mutant astrocytomas is strongly correlated with MYC overexpression
Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysis
MICROBIOME
, cilt.12, sa.1, 2024 (SCI-Expanded)





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The Potential Role of Boron in the Modulation of Gut Microbiota Composition: An In Vivo Pilot Study
PHARMACEUTICALS
, cilt.17, sa.10, 2024 (SCI-Expanded)




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Var3PPred: variant prediction based on 3-D structure and sequence analyses of protein-protein interactions on autoinflammatory diseases
Longitudinal non-targeted metabolomic profiling of urine samples for monitoring of kidney transplantation patients
Effect of the switch status of Helicobacter pylori outer inflammatory protein A on gastric diseases
Identification of Molecular and Genetic Resistance Mechanisms in a <i>Candida auris</i> Isolate in a Tertiary Care Center in Turkiye
Phenotype screens of murine pancreatic cancer identify a Tgf-α-Ccl2-paxillin axis driving human-like neural invasion
Nosocomial infection of <i>C. auris</i> in COVID-19 Intensive Care Unit in Turkiye and Phylogenetic Analysis of Isolates
Metabolic pathways of potential miRNA biomarkers derived from liquid biopsy in epithelial ovarian cancer
Metabolomic Analyses to Identify Candidate Biomarkers of Cystinosis
PANACEA: network-based methods for pharmacotherapy prioritization in personalized oncology
Gene pathway analysis of the endometrium at the start of the window of implantation in women with unexplained infertility and unexplained recurrent pregnancy loss: is unexplained recurrent pregnancy loss a subset of unexplained infertility?
Effects of Ramadan intermittent fasting on gut microbiome: is the diet key?
Brave new surfactant world revisited by thermoalkalophilic lipases: computational insights into the role of SDS as a substrate analog
PHYSICAL CHEMISTRY CHEMICAL PHYSICS
, cilt.25, sa.3, ss.2234-2247, 2022 (SCI-Expanded)




CANDIDATE BIOMARKER(S) FOR CYSTINOSIS WITH OMIC-BASED TECHNOLOGY: FROM LABORATORY TO BED-SIDE
PEDIATRIC NEPHROLOGY
, sa.11, ss.2831, 2022 (SCI-Expanded)

Colibactin possessing <i>E</i>. <i>coli</i> isolates in association with colorectal cancer and their genetic diversity among Pakistani population
Microbiota and Kegg analysis after allogeneic stem cell transplantation for hematological malignancies
HLA
, sa.5, ss.499, 2022 (SCI-Expanded)

Understanding the Role of the Microbiome in Cancer Diagnostics and Therapeutics by Creating and Utilizing ML Models
Applied Sciences (Switzerland)
, cilt.12, sa.9, 2022 (SCI-Expanded)

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Identifying and elucidating the roles of Y198N and Y204F mutations in the PAH enzyme through molecular dynamic simulations.
Journal of biomolecular structure & dynamics
, cilt.40, sa.19, ss.9018-9029, 2022 (SCI-Expanded)



RDDSVM: accurate prediction of A-to-I RNA editing sites from sequence using support vector machines
Molecular modelling of the FOXO4-TP53 interaction to design senolytic peptides for the elimination of senescent cancer cells.
Bridging the Bridging Imidazolate in the Bimetallic Center of the Cu/Zn SOD1 and ALS
Microbiota analysis in allogeneic stem cell transplant patients with in AML and MDS
EUROPEAN JOURNAL OF IMMUNOLOGY
, ss.326, 2021 (SCI-Expanded)

A global metagenomic map of urban microbiomes and antimicrobial resistance
CELL
, cilt.184, sa.13, ss.3376-3410, 2021 (SCI-Expanded)




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- References: 1
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Endometrial gene expression profiling of recurrent implantation failure after in vitro fertilization
driveR: a novel method for prioritizing cancer driver genes using somatic genomics data
The importance of dysregulated miRNAs on ovarian cysts and epithelial ovarian cancer
EUROPEAN JOURNAL OF GYNAECOLOGICAL ONCOLOGY
, cilt.42, sa.1, ss.66-72, 2021 (SCI-Expanded)



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A comprehensive study on identifying the structural and functional SNPs of human neuronal membrane glycoprotein M6A (GPM6A)
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
, cilt.39, sa.8, ss.2693-2701, 2021 (SCI-Expanded)




CogNet: classification of gene expression data based on ranked active-subnetwork- oriented KEGG pathway enrichment analysis
Mutations and Copy Number Alterations in IDH Wild-Type Glioblastomas Are Shaped by Different Oncogenic Mechanisms
Progesterone at high doses reduces the growth of U87 and A172 glioblastoma cells: Proteomic changes regarding metabolism and immunity
High-throughput profiling reveals perturbation of endoplasmic reticulum stress-related genes in atherosclerosis induced by high-cholesterol diet and the protective role of vitamin E
Probing the Structural Dynamics of the Catalytic Domain of Human Soluble Guanylate Cyclase.
Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment
NATURE MEDICINE
, cilt.26, sa.6, ss.941-954, 2020 (SCI-Expanded)




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- Social Media
- Shares, Likes & Comments: 396
HriGFP Novel Flourescent Protein: Expression and Applications
Whole exome sequencing-based analysis to identify DNA damage repair deficiency as a major contributor to gliomagenesis in adult diffuse gliomas
A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer.
Nature genetics
, cilt.52, sa.4, ss.448-457, 2020 (SCI-Expanded)





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Comparison of endometrial prostanoid profiles in three infertile subgroups: the missing part of receptivity?
Adaptive phenotypic modulations lead to therapy resistance in chronic myeloid leukemia cells
SARS-CoV-2 isolation and propagation from Turkish COVID-19 patients
Investigation of base excision repair gene variants in late-onset Alzheimer's disease.
Potential Marker Pathways in the Endometrium That May Cause Recurrent Implantation Failure
Comparison of Dendritic Cell Activation by Virus-Based Vaccine Delivery Vectors Emphasizes the Transcriptional Downregulation of the Oxidative Phosphorylation Pathway.
Identification of epilepsy related pathways using genome-wide DNA methylation measures: A trio-based approach
Enhancing Enzymatic Properties of Endoglucanase I Enzyme from Trichoderma Reesei via Swapping from Cellobiohydrolase I Enzyme
A possible founder mutation in FZD6 gene in a Turkish family with autosomal recessive nail dysplasia.
Computational drug repurposing to predict approved and novel drug-disease associations.
Journal of molecular graphics & modelling
, cilt.85, ss.91-96, 2018 (SCI-Expanded)



Ameliorative potential of Lavandula stoechas in metabolic syndrome via multitarget interactions
Prediction of HIV Drug Resistance by Combining Sequence and Structural Properties.
IEEE/ACM transactions on computational biology and bioinformatics
, cilt.15, sa.3, ss.966-973, 2018 (SCI-Expanded)




Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health.
ZK DrugResist 2.0: A TextMiner to extract semantic relations of drug resistance from PubMed.
Integrated Genomic and Proteomic Analyses of Multiple Sclerosis
NEUROLOGY
, cilt.88, 2017 (SCI-Expanded)

An integrative study on the impact of highly differentially methylated genes on expression and cancer etiology.
Ligand binding pocket of a novel Allatostatin receptor type C of stick insect, Carausius morosus
Analysis of the interplay between methylation and expression reveals its potential role in cancer aetiology.
Active Subnetwork GA: A Two Stage Genetic Algorithm Approach to Active Subnetwork Search
Predicting the impact of mutations on the specific activity of Bacillus thermocatenulatus lipase using a combined approach of docking and molecular dynamics
RACK1 Is an Interaction Partner of ATG5 and a Novel Regulator of Autophagy
JOURNAL OF BIOLOGICAL CHEMISTRY
, cilt.291, sa.32, ss.16753-16765, 2016 (SCI-Expanded)



The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium inaugural meeting report
MICROBIOME
, cilt.4, 2016 (SCI-Expanded)





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IDH-mutant glioma specific association of rs55705857 located at 8q24.21 involves MYC deregulation
Design and characterizations of two novel cellulases through single-gene shuffling of Cel12A (EG3) gene from Trichoderma reseei
PROTEIN ENGINEERING DESIGN & SELECTION
, cilt.29, sa.6, ss.219-229, 2016 (SCI-Expanded)




Potential of GRID2 receptor gene for preventing TNF-induced neurodegeneration in autism
Probing the roles of two tryptophans surrounding the unique zinc coordination site in lipase family I.5
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
, cilt.84, sa.1, ss.129-142, 2016 (SCI-Expanded)



Prediction of neddylation sites from protein sequences and sequence-derived properties
Assessment of global and gene-specific DNA methylation in rat liver and kidney in response to non-genotoxic carcinogen exposure
'Epistatic interactions between autoimmunity and genetic thrombophilia' Reply
EUROPEAN JOURNAL OF HUMAN GENETICS
, cilt.23, sa.10, ss.1279-1280, 2015 (SCI-Expanded)


Zinc Modulates Self-Assembly of Bacillus thermocatenulatus Lipase
Modulating the thermostability of Endoglucanase I from <i>Trichoderma reesei</i> using computational approaches
Molecular diversity of LysM carbohydrate-binding motifs in fungi
CSF Proteomics Identifies Specific and Shared Pathways for Multiple Sclerosis Clinical Subtypes
Identification of possible pathogenic pathways in Behcet's disease using genome-wide association study data from two different populations
PANOGA: a web server for identification of SNP-targeted pathways from genome-wide association study data
Direct in vitro selection of titanium-binding epidermal growth factor
The Conserved Lid Tryptophan, W211, Potentiates Thermostability and Thermoactivity in Bacterial Thermoalkalophilic Lipases
MIR376A Is a Regulator of Starvation-Induced Autophagy
In silico docking researches of some human proteins with anthranoids
PLANTA MEDICA
, cilt.79, sa.13, ss.1175, 2013 (SCI-Expanded)

Identifying SNP targeted pathways in partial epilepsies with genome-wide association study data
Modifying the catalytic preference of tributyrin in Bacillus thermocatenulatus lipase through in-silico modeling of enzyme-substrate complex
PROTEIN ENGINEERING DESIGN & SELECTION
, cilt.26, sa.5, ss.325-333, 2013 (SCI-Expanded)




The Identification of Pathway Markers in Intracranial Aneurysm Using Genome-Wide Association Data from Two Different Populations
The Vroman effect: Competitive protein exchange with dynamic multilayer protein aggregates
Prediction of peptides binding to MHC class I and II alleles by temporal motif mining
Stress effects caused by the expression of a mutant cellobiohydrolase I and proteasome inhibition in Trichoderma reesei Rut-C30
A novel magnetic particle-modified electrochemical sensor for immunosensor applications
Discrimination of Thermophilic and Mesophilic Proteins Using Reduced Amino Acid Alphabets with n-Grams
From in silico to in vitro: Modelling and production of Trichoderma reesei endoglucanase 1 and its mutant in Pichia pastoris
Improved Thermostability of Clostridium thermocellum Endoglucanase Cel8A by Using Consensus-Guided Mutagenesis
APPLIED AND ENVIRONMENTAL MICROBIOLOGY
, cilt.78, sa.9, ss.3458-3464, 2012 (SCI-Expanded)




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A homologous production system for Trichoderma reesei secreted proteins in a cellulase-free background
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
, cilt.93, sa.4, ss.1601-1608, 2012 (SCI-Expanded)



Classification of GPCRs Using Family Specific Motifs
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
, cilt.8, sa.6, ss.1495-1508, 2011 (SCI-Expanded)




A New Methodology to Associate SNPs with Human Diseases According to Their Pathway Related Context
Effect of Codon Optimization on the Expression of Trichoderma reesei Endoglucanase 1 in Pichia pastoris
Novel Hydrophobins from Trichoderma Define a New Hydrophobin Subclass: Protein Properties, Evolution, Regulation and Processing
Structural characterization of recombinant bovine Go alpha by spectroscopy and homology modeling
SPECTROSCOPY-BIOMEDICAL APPLICATIONS
, cilt.26, sa.4-5, ss.213-229, 2011 (SCI-Expanded)

Generation and Analysis of Expressed Sequence Tags from Olea europaea L.
Biomarker discovery for toxicity
An Ariadnes thread to the identification and annotation of noncoding RNAs in eukaryotes
Community-wide assessment of GPCR structure modelling and ligand docking: GPCR Dock 2008
NATURE REVIEWS DRUG DISCOVERY
, cilt.8, sa.6, ss.455-463, 2009 (SCI-Expanded)



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Label-Free Biosensors for the Detection and Quantification of Cardiovascular Risk Markers
Sandwich-type, antibody microarrays for the detection and quantification of cardiovascular risk markers
Molecular characterization of cDNA encoding resistance gene-like sequences in Buchloe dactyloides
Triticum durum metallothionein - Isolation of the gene and structural characterization of the protein using solution scattering and molecular modeling
JOURNAL OF BIOLOGICAL CHEMISTRY
, cilt.280, sa.14, ss.13701-13711, 2005 (SCI-Expanded)




Protein structural class determination using support vector machines
COMPUTER AND INFORMATION SCIENCES - ISCIS 2004, PROCEEDINGS
, cilt.3280, ss.82-89, 2004 (SCI-Expanded)


Repair of lacerated inferior vena cava with the intravascular tube graft in redo cardiac surgery
JOURNAL OF THORACIC AND CARDIOVASCULAR SURGERY
, cilt.121, sa.1, ss.187-188, 2001 (SCI-Expanded)




TcR recognition of the MHC-peptide dimer: Structural properties of a ternary complex
Free energy mapping of class I MHC molecules and structural determination of bound peptides
Color Doppler imaging in adjunct to contrast arteriography in evaluation of severe peripheral vascular disease
Tricuspid valve repair by septal or posterior leaflet transposition
INFLUENCE OF APROTININ ON EARLY GRAFT THROMBOSIS IN PATIENTS UNDERGOING MYOCARDIAL REVASCULARIZATION
EUROPEAN JOURNAL OF CARDIO-THORACIC SURGERY
, cilt.8, sa.12, ss.651-656, 1994 (SCI-Expanded)




TOWARD COMPUTATIONAL DETERMINATION OF PEPTIDE-RECEPTOR STRUCTURE
NECESSARY CONDITIONS FOR AVOIDING INCORRECT POLYPEPTIDE FOLDS IN CONFORMATIONAL SEARCH BY ENERGY MINIMIZATION
DETERMINATION OF AROMATIC COMPOSITION OF FUELS BY LASER RAMAN-SPECTROSCOPY
ANALYSIS OF AVIATION TURBINE FUEL COMPOSITION BY LASER RAMAN-SPECTROSCOPY
AUTONOMIC NERVOUS-SYSTEM REGULATION OF EPICARDIAL CORONARY VEIN SYSTOLIC AND DIASTOLIC BLOOD VELOCITY AS MEASURED BY A LASER DOPPLER-VELOCIMETER
CANADIAN JOURNAL OF PHYSIOLOGY AND PHARMACOLOGY
, cilt.64, sa.12, ss.1463-1472, 1986 (SCI-Expanded)



BEAT TO BEAT NEURAL REGULATION OF EPICARDIAL VEIN VELOCITY
CIRCULATION
, sa.4, ss.76, 1985 (SCI-Expanded)

Diğer Dergilerde Yayınlanan Makaleler
Integrated bioinformatics analysis of validated and circulating miRNAs in ovarian cancer
GUT MICROBIOTA EFFECTS IN HEMATOPOIETIC STEM CELL TRANSPLANT PATIENTS ALLOJENİK KÖK HÜCRE NAKİLLERİNDE MİKROBİYOTA ETKİSİ
Differential gene expression analysis of human cumulus cells
CLINICAL AND EXPERIMENTAL REPRODUCTIVE MEDICINE-CERM
, cilt.46, sa.2, ss.76-86, 2019 (ESCI)



Expression of the bone morphogenetic protein-2 (BMP2) in the human cumulus cells as a biomarker of oocytes and embryo quality
Systems Biological Applications for Fungal Gene Expression
GENE EXPRESSION SYSTEMS IN FUNGI: ADVANCEMENTS AND APPLICATIONS
, ss.385-393, 2016 (Hakemli Dergi)

Application of automatic mutation-gene pair extraction to diseases
Journal of Bioinformatics and Computational Biology
, cilt.5, sa.6, ss.1261-1275, 2007 (Scopus)


Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler
Alterations of Specific Metabolites During Epileptogenesis in Plasma of Rats with Lithium-Pilocarpine-Induced Temporal Lobe Epilepsy
FENS Forum 2024, Vienna, Avusturya, 25 - 29 Haziran 2024
Classification of Variants in Systemic Autoinflammatory Diseases using 3D Structures and Protein-protein Interactions
American Society of Human Genetics Annual Meeting , Washington, Amerika Birleşik Devletleri, 1 - 05 Kasım 2023, ss.516
Comprehensive Analysis of Low-Frequency Genetic Variants through Exome Sequencing in Familial Multiple Sclerosis
75. American Society of Human Genetics Congress, Washington, Amerika Birleşik Devletleri, 1 - 05 Kasım 2023, ss.1
Data Mining for Predicting Mechanical Complications in Postoperatively Well-Aligned Adult Spinal Deformity Patients using XgBoost Modelling
Eurospine Annual Meeting , Milan, İtalya, 19 - 22 Ekim 2022
Corneal Bacterial Microbiome In Patients With Keratoconus Using Next-Generation Sequencing-Based 16S Gene Analysis
The 40th Congress of the ESCRS, Milan, İtalya, 06 Eylül 2022
İleri Biyoinformatik Analiz Yöntemleri Kullanılarak Keratokonus Hastaları ile Sağlıklı Olgular Arasında Oküler Yüzey Mikrobiyota Farklılığının Araştırılması
TOD. 55. Ulusal Kongresi, Antalya, Türkiye, 03 Kasım 2021
Functional Analysis of Validated Circulating MicroRNA-Based Signature for Prediction of Ovarian Cancer
8th Multidisciplinary Cancer Research Congress, Bursa, Türkiye, 15 - 17 Ocak 2021

Oral premalin lezyonlarda rol oynayan immün-yanıt ilişkili yolaklar ve bu yolaklarda rol alan hiper/hipometile immün genlerin metilasyon array teknolojisi ile tespiti
2. Ulusal İmmünoterapi ve Onkoloji Kongresi, Antalya, Türkiye, 31 Ekim - 04 Kasım 2019, ss.20
Intraoperative neuromonitoring of blink reflex during skull base surgeries and its correlation with clinical outcome.
7 th Congress of the International Society of Intraoperative Neurophysiology and Educational Course, Vienna, Avusturya, 28 Ekim - 02 Kasım 2019, ss.84
The Partitioned pH Model: the new mathematical model to evaluate acid-base status
ESICM LIVES 2019, Berlin, Almanya, 28 Ekim - 02 Kasım 2019, ss.463
Investigation of the relationship between cellular adaptation and therapeutic resistance in chronic myeloid leukemia cells under imatinib pressure
1st INTERNATIONAL MULTIDISCIPLINARY CANCER RESEARCH CONGRESS, 18 - 22 Eylül 2019
An Adaptive Phenotypic Shift Leads to TKI Resistance by Acquisition Of Leukemic Stem Cell-Like Properties in CML Cells
2nd İstanbul Immunohematology Summit, 2 - 04 Mayıs 2019
Leishmaniasis in Turkey: comparison of the microbiota of the intact skin and lesion site in patients with cutaneous leishmaniasis
29. ECCMID, Amsterdam, Hollanda, 13 - 16 Nisan 2019
Irritable bowel syndrome and microbiota: first clinical study on correlationsbetween gut bacteria, Dientamoeba fragilis, Blastocystis and eating habits in Turkey
29th ECCMID the European Congress of Clinical Microbiology and InfectiousDiseases, Amsterdam, Hollanda, 13 - 16 Nisan 2019
ENDOMETRIAL GENE EXPRESSION IN PATIENTS WITH RECURRENT IMPLANTATION FAILURE.
73rd Scientific Congress and Expo of the American-Society-for-Reproductive-Medicine (ASRM), San-Antonio, Kuzey Mariana Adaları, 28 Ekim - 01 Kasım 2017, cilt.108

RAC1 SIGNALING PATHWAY IS CRUCIAL FOR ETIOLOGY OF REPEATED IMPLANTATION FAILURE (RIF).
73rd Scientific Congress and Expo of the American-Society-for-Reproductive-Medicine (ASRM), San-Antonio, Kuzey Mariana Adaları, 28 Ekim - 01 Kasım 2017, cilt.108

Integrated Genomic and Proteomic Analyses of Multiple Sclerosis
American Academy of Neurology 69th Annual Meeting, 22 - 28 Nisan 2017
Characterization of the binding pocket of Allatostatin receptor type C of stick insect
Glisten Symposium, Porto, Portekiz, 29 - 31 Mart 2017
Bioinformatics challenges and potentialities in studying extreme environments
12th International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, CIBB 2015, Naples, İtalya, 10 - 12 Eylül 2015, cilt.9874 LNCS, ss.205-219

ZK DrugResist: Automatic extraction of drug resistance mutations and expression level changes from medline abstracts
7th International Conference on Bioinformatics Models, Methods and Algorithms, BIOINFORMATICS 2016 - Part of 9th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2016, Rome, İtalya, 21 - 23 Şubat 2016, ss.168-173

A linkage analysis and a genome-wide association study for multiple sclerosis
XIV. Ulusal Tıbbi Biyoloji ve Genetik, Türkiye, 27 - 30 Ekim 2015
Magnesium confers stability to the PYL10 PP2C complex at high temperatures Insights from molecular dynamics simulations
2nd International Symposium on Magnesium in Crop Production, Food Quality and Human Health, Sao-Paulo, Brezilya, 4 - 06 Kasım 2014
Zinc induces self assembly of thermoalkalophilic lipases A strategy for thermostability
The 28th Annual Symposium of Protein Society, San Diego, CA, Amerika Birleşik Devletleri, 27 - 30 Temmuz 2014
Classification of cohesin family using class specific motifs
2013 8th International Symposium on Health Informatics and Bioinformatics, HIBIT 2013, Ankara, Türkiye, 25 - 27 Eylül 2013

A genetic algorithm approach to active subnetwork search applied to GWAS data
2013 8th International Symposium on Health Informatics and Bioinformatics, HIBIT 2013, Ankara, Türkiye, 25 - 27 Eylül 2013

The Identification of Pathway Markers in Behcet’xxs Disease Using Genomewide Association Data From Two Different Populations.
ARTHRITIS AND RHEUMATISM, Washington, Kiribati, 9 - 14 Kasım 2012, cilt.64, ss.434-435
Integration of GWAS and microarray data to understand the disease mechanism
2012 7th International Symposium on Health Informatics and Bioinformatics, HIBIT 2012, Cappadocia, Türkiye, 19 - 22 Nisan 2012, ss.95-100

Modifying the chain length selectivity of Bacillus thermocatenulatus lipase through computational models of the enzyme substrate complex
İstanbul İstatistiksel Fizik Günleri, 28 - 30 Haziran 2012
Pattern Recognition for Subfamily Level Classification of GPCRs Using Motif Distillation and Distinguishing Power Evaluation
7th International-Association-for-Pattern-Recognition (IAPR) International Conference on Pattern Recognition in Bioinformatics (PRIB), Tokyo, Japonya, 8 - 10 Kasım 2012, cilt.7632, ss.267-276


Representation of Protein Secondary Structure Using Bond-Orientational Order Parameters
7th International-Association-for-Pattern-Recognition (IAPR) International Conference on Pattern Recognition in Bioinformatics (PRIB), Tokyo, Japonya, 8 - 10 Kasım 2012, cilt.7632, ss.188-197


Computational Models for Chain Length Selectivity of Bacillus thermocatenulatus lipase
The International Conference on Enzyme Science and Technology, Muğla, Türkiye, 31 Ekim - 04 Kasım 2011
Modification of Media pH Significantly Improves Recombinant Protein Stabilityin Pichia pastoris
The International Conference on Enzyme Science and Technology, Muğla, Türkiye, 31 Ekim - 04 Kasım 2011
Cloning of Hordeum spontenaum genes which are expressed upon zinc deficiency using suppressed sub-stractive hybridization method
European Biotechnology Congress, İstanbul, Türkiye, 28 Eylül - 01 Ekim 2011, cilt.22

IDENTIFICATION OF TRANSCRIPTION FACTOR BINDING SITES IN PROMOTER DATABASES
6th International Symposium on Health Informatics and Bioinformatics (HIBIT), İzmir, Türkiye, 2 - 05 Mayıs 2011, ss.68-73


Physico-chemical properties of DNA in phylogeny construction
2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010, Antalya, Türkiye, 20 - 22 Nisan 2010, ss.27-30

Predict permissive sites of protein for insertion domain
2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010, Antalya, Türkiye, 20 - 22 Nisan 2010, ss.133-136

Multiple sequence alignment based on structural properties
2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010, Antalya, Türkiye, 20 - 22 Nisan 2010, ss.39-44


SUMOtr: SUMOylation site prediction based on 3D structure and hydrophobicity
2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010, Antalya, Türkiye, 20 - 22 Nisan 2010, ss.93-97

High throughput protein expression in Pichia pastoris using a non repressing carbon source
The Protein Istanbul (PROTIST), İstanbul, Türkiye, 23 - 25 Nisan 2010
From in silico to in vitro Modelling and production of Trichoderma reesei endoglucanase 1 mutants in Pichia pastoris for textile biofinishing
III International Conference on Environmental, Industrial and Applied Microbiology “ (BioMicroWorld2009), Lizbon, Portekiz, 2 - 04 Aralık 2009
Optimization of morphological data in numerical taxonomy analysis using genetic algorithms feature selection method
11th Annual Genetic and Evolutionary Computation Conference, GECCO-2009, Montreal, Kanada, 8 - 12 Temmuz 2009, cilt.2009-January, ss.1967-1970


An entropy based heuristic model for predicting functional sub-type divisions of protein families
11th Annual Genetic and Evolutionary Computation Conference, GECCO-2009, Montreal, Kanada, 8 - 12 Temmuz 2009, cilt.2009-January, ss.2173-2177

Prediction Of Peptides Binding To MHC Class I Alleles By Partial Periodic Pattern Mining
International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing, Shanghai, Çin, 3 - 05 Ağustos 2009, ss.315-316


DockPro: A VR-based tool for protein-protein docking problem
7th ACM SIGGRAPH International Conference on Virtual-Reality Continuum and Its Applications in Industry, VRCAI 2008, Singapore, Singapur, 8 - 09 Aralık 2008

Cloning of T reesei Cellulase Components in P pastoris and Impact of Loop Mutations on EGI of T reesei
International Enzyme Engineering Symposium (IEES’08), Aydın, Türkiye, 1 - 05 Ekim 2008
Discovery of Biomarkers for Hexachlorobenzene Toxicity Using Population Based Methods on Gene Expression Data
3rd IAPR International Conference on Pattern Recognition in Bioinformatics, Melbourne, Avustralya, 15 - 17 Ekim 2008, cilt.5265, ss.412-423


Biosensors for the detection of cardiovascular risk markers in human serum
Conference on PhD Research in Microelectronics and Electronics, İstanbul, Türkiye, 22 - 25 Haziran 2008, ss.25-28



Purification characterization and modeling of recombinant Goalpha protein
Gordon Research Conferences, Phosphorylation & G-Protein Mediated Signaling Networks, 10 - 15 Haziran 2007
Comparison of different feature extraction methods on classification of gene expression data
IEEE 15th Signal Processing and Communications Applications Conference, Eskişehir, Türkiye, 11 - 13 Haziran 2007, ss.921-923


Evolutionary Selection of Minimum Number of Features for Classification of Gene Expression Data Using Genetic Algorithms
Annual Conference of Genetic and Evolutionary Computation Conference, London, Kanada, 7 - 11 Temmuz 2007, ss.401-406


Functional classification of G-protein coupled receptors, based on their specific ligand coupling patterns
EvoWorkshops 2006: EvoBIO, EvoCOMNET, EvoHOT, EvoIASP, EvoINTERACTION, EvoMUSART, and EvoSTOC, Budapest, Macaristan, 10 - 12 Nisan 2006, cilt.3907 LNCS, ss.1-12

Modified association rule mining approach for the MHC-peptide binding problem
21st International Symposium on Computer and Information Sciences (ISCIS 2006), İstanbul, Türkiye, 1 - 03 Kasım 2006, cilt.4263, ss.165-167


Prediction and classification for GPCR sequences based on ligand specific features
21st International Symposium on Computer and Information Sciences (ISCIS 2006), İstanbul, Türkiye, 1 - 03 Kasım 2006, cilt.4263, ss.174-175


Immobilized Glucose Oxsidase for Better Stability and Reuse in Biobleaching of Textiles
7th International Symposium on Biocatalysis and biotransformations, Delf, Hollanda, 3 - 08 Temmuz 2005, ss.75
Immobilized Glucose Oxidase GOD for better stability and reuse in biobleaching of textiles
7th International Symposium on Biocatalysis and Biotransformations (BIOTRANS 2005), Delft, Hollanda, 3 - 08 Temmuz 2005
Biosensor implementation for cardiovascular risk marker analysis
4th IEEE Conference on Sensors, Irvine, İngiltere, 31 Ekim - 03 Kasım 2005, ss.303-305


Protein Structural Class Determination Using Support Vector Machines
19th International Symposium on Computer and Information Sciences, 27 - 29 Ekim 2004
Treatment of viscose with crosslinked commercial cellulases
3rd International Conference on Textile Biotechnology (INTB04), Graz, Avusturya, 13 - 16 Haziran 2004
Effect of feature extraction and feature selection on expression data from epithelial ovarian cancer
25th Annual International Conference of the IEEE-Engineering-in-Medicine-and-Biology-Society, Cancun, Meksika, 17 - 21 Eylül 2003, cilt.25, ss.3559-3562

