Yayınlar & Eserler

Yayın Ağı
SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler 22

1. Molecular Consequences of CCN6 Variants Encoding WISP3 in Progressive Pseudorheumatoid Dysplasia

Guven Tasbicen G., Tufan A., Savsar B., Bulbul A. A., Tonbul Z., Guzel E., et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES , cilt.26, ss.1-33, 2025 (SCI-Expanded)

2. Peptide-Based Regulation of TNF-α-Mediated Cytotoxicity

TEMUR B. Z., TİMUÇİN V. C., ATİK A. E., KOCAGÖZ Z. T., CAN Ö.
Biomolecules , cilt.15, sa.4, 2025 (SCI-Expanded) identifier identifier

3. Experimental and Computational Insights into the Structural Dynamics of the Fc Fragment of IgG1 Subtype from Biosimilar VEGF-Trap

Destan E., Turkut E., Aldeniz A., Kang J., Tosha T., Yabashi M., et al.
SMALL STRUCTURES , ss.1-14, 2025 (SCI-Expanded)

4. A rare case of uncharacterized autoinflammatory disease: Patient carrying variations in NLRP3 and TNFRSF1A genes.

Kilinc O. C., Gayibova K., Onen M. O., Onat U. I., Bülbül A. A., Timucin A. C., et al.
American journal of medical genetics. Part A , cilt.194, sa.10, 2024 (SCI-Expanded) identifier identifier identifier

5. Structure based computational RNA design towards MafA transcriptional repressor implicated in multiple myeloma

Akdeniz G. Y., Timuçin A. C.
JOURNAL OF MOLECULAR GRAPHICS AND MODELLING , cilt.132, ss.1-17, 2024 (SCI-Expanded)

6. Var3PPred: variant prediction based on 3-D structure and sequence analyses of protein-protein interactions on autoinflammatory diseases

Bülbül A. A., TİMUÇİN E., TİMUÇİN A. C., SEZERMAN O. U., TAHİR TURANLI E.
PeerJ , cilt.12, sa.5, 2024 (SCI-Expanded) identifier identifier

7. Computational completion of the Aurora interaction region of N-Myc in the Aurora a kinase complex

Altiner P., Çınaroğlu S. S., Timuçin A. C., Timucin E.
SCIENTIFIC REPORTS , cilt.13, sa.1, 2023 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

8. Detection of a rare variant in PSTPIP1 through three generations in a family with an initial diagnosis of FMF/MKD-overlapping phenotype

Özkılınç Önen M., Onat U. İ., Uğurlu S., Timuçin A. C., Öz Arslan D., Everest E., et al.
RHEUMATOLOGY , sa.9, ss.3188-3196, 2023 (SCI-Expanded) identifier identifier

9. Modeling and dynamical analysis of the full-length structure of factor XII with zinc.

Kılınç E., Can Timucin A. C., Selim Cinaroglu S., Timucin E.
Journal of molecular modeling , cilt.28, sa.5, ss.129, 2022 (SCI-Expanded) identifier identifier identifier

10. Toward Compilation of Balanced Protein Stability Data Sets: Flattening the Delta Delta G Curve through Systematic Enrichment

Kebabci N., TİMUÇİN A. C., TİMUÇİN E.
JOURNAL OF CHEMICAL INFORMATION AND MODELING , cilt.62, sa.5, ss.1345-1355, 2022 (SCI-Expanded) identifier identifier identifier

11. Bridging the Bridging Imidazolate in the Bimetallic Center of the Cu/Zn SOD1 and ALS

TİMUÇİN A. C., Cinaroglu S. S., SEZERMAN O. U., TİMUÇİN E.
FRONTIERS IN CHEMISTRY , cilt.9, 2021 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

12. Structure based peptide design, molecular dynamics and MM-PBSA studies for targeting C terminal dimerization of NFAT5 DNA binding domain

Timucin A. C.
JOURNAL OF MOLECULAR GRAPHICS & MODELLING , cilt.103, 2021 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

13. The sex-dependent anti-depressant-like effects of zeatin in rat behavioral despair model as a candidate A2A receptor ligand

Oz P., Timucin A. C., Teomete S., Akpunar F., Tufanc C., Ogur D., et al.
NEUROSCIENCE LETTERS , cilt.734, 2020 (SCI-Expanded) identifier identifier identifier

14. Immunotherapy approaches on innate immunity for SARS-Cov-2

Arslan B. A., Timucin A. C.
ACTA VIROLOGICA , cilt.64, sa.4, ss.389-395, 2020 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

15. Selective targeting of antiapoptotic BCL-2 proteins in cancer

Timucin A. C., Basaga H., Kutuk O.
MEDICINAL RESEARCH REVIEWS , cilt.39, sa.1, ss.146-175, 2019 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

16. Pro-apoptotic effects of lipid oxidation products: HNE at the crossroads of NF-kappa B pathway and anti-apoptotic Bcl-2

Timucin A. C., Basaga H.
FREE RADICAL BIOLOGY AND MEDICINE , cilt.111, ss.209-218, 2017 (SCI-Expanded) identifier identifier identifier

17. AMP-Activated Protein Kinase Couples 3-Bromopyruvate-Induced Energy Depletion to Apoptosis via Activation of FoxO3a and Upregulation of Proapoptotic Bcl-2 Proteins

Bodur C., Karakas B., Timucin A. C., Tezil T., Basaga H.
MOLECULAR CARCINOGENESIS , cilt.55, sa.11, ss.1584-1597, 2016 (SCI-Expanded) identifier identifier identifier

18. SIRT6 Is a Positive Regulator of Aldose Reductase Expression in U937 and HeLa cells under Osmotic Stress: In Vitro and In Silico Insights

Timucin A. C., Basaga H.
PLOS ONE , cilt.11, sa.8, 2016 (SCI-Expanded) Creative Commons License identifier identifier identifier

19. Screening of new antileukemic agents from essential oils of algae extracts and computational modeling of their interactions with intracellular signaling nodes

Ataseyer-Arslan B., Yilancioglu K., Kalkan Z., Timucin A. C., Gur H., Isik F. B., et al.
EUROPEAN JOURNAL OF PHARMACEUTICAL SCIENCES , ss.120-131, 2016 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

20. SIRT1 contributes to aldose reductase expression through modulating NFAT5 under osmotic stress: In vitro and in silico insights

Timucin A. C., Bodur C., Basaga H.
CELLULAR SIGNALLING , cilt.27, sa.11, ss.2160-2172, 2015 (SCI-Expanded) identifier identifier identifier

21. ANTIBODY ARRAY-BASED IMMUNOSENSOR FOR DETECTING CARDIOVASCULAR DISEASE RISK MARKERS

Timucin C., Gul O., Kutuk O., Basaga H.
JOURNAL OF IMMUNOASSAY & IMMUNOCHEMISTRY , cilt.33, sa.3, ss.275-290, 2012 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

22. Identification of biomarkers for the antiangiogenic and antitumour activity of the superoxide dismutase 1 (SOD1) inhibitor tetrathiomolybdate (ATN-224)

Donate F., Juarez J. C., Burnett M. E., Manuia M. M., Guan X., Shaw D. E., et al.
BRITISH JOURNAL OF CANCER , cilt.98, sa.4, ss.776-783, 2008 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier
Diğer Dergilerde Yayınlanan Makaleler 6

1. Experimental and Computational Insights into the Structural Dynamics of the Fc Fragment of IgG1 Subtype from Biosimilar VEGF-Trap

Destan E., Turkut E., Aldeniz A., Kang J., Tosha T., Yabashi M., et al.
BIORXIV , sa.-, ss.1-28, 2024 (Hakemsiz Dergi)

2. Selective cytotoxicity of chemical composition of Spirulina platensis extract in endometrial cells: In vitro and in silico approach

Atasever Arslan B., Yılancıoğlu K., Timuçin A. C., Kalkan Z., Kuşoğlu Gültekin S., Çetiner S.
KSU TARIM VE DOGA DERGISI-KSU JOURNAL OF AGRICULTURE AND NATURE , cilt.0, 2022 (Hakemli Dergi)

3. Towards Compilation of Balanced Protein Stability Datasets: Flattening the ΔΔG Curve through Systematic Under-sampling

Timuçin A. C., Timuçin E.
BIORXIV , cilt.0, ss.1-31, 2021 (Hakemsiz Dergi)

4. Molecular Dynamics and MM-PBSA Studies for Deciphering Molecular Interactions of Valproic Acid with CYP2C9 Mutants F114L and I207T

Timuçin A. C.
Süleyman Demirel Üniversitesi Fen Bilimleri Enstitüsü Dergisi , cilt.25, ss.64-73, 2021 (Hakemli Dergi)

5. Conserved Amino Acids in HCoV-HKU1 and SARS-Cov2 at RNA-dependent RNA Polymerase (RdRp) Motifs

Timuçin A. C.
Anatolian Journal of Biology , cilt.2, ss.17-24, 2021 (Hakemli Dergi) Sürdürülebilir Kalkınma

6. Computational Modeling of Trans-Zeatin as a Novel Target of Adenosine A2A Receptor: Insights into Molecular Interactions

Timuçin A. C.
The Journal of Neurobehavioral Sciences , cilt.7, ss.118-129, 2020 (Hakemli Dergi)
Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler 15

1. Towards mono-functionalized phthalocyanines designed to be anchored at the active site of enzymes

Alaghaa H. Z., Timuçin A. C., Timuçin E., Dumoulin F., Ricoux R., İşçi Ü.
36th National Chemistry Congress (UKK2025), Van, Türkiye, 31 Ağustos - 03 Eylül 2025, ss.1, (Özet Bildiri)

2. Molecular Docking, Weak Interaction, and Molecular Dynamics Studies of Novel Chalcone-Based Structures as Potential Inhibitors of Tubulin and EGFR for Cancer Therapy

Yıldırım Akdeniz G., Timuçin A. C., Başağa S. H.
33rd ISMB (Intelligent Systems for Molecular Biology) Conference/European Conference on Computational Biology (the 24th Annual Conference), Liverpool, İngiltere, 20 - 24 Temmuz 2025, ss.1, (Özet Bildiri)

3. Impact of LAMA5 Variants on Immune Cell Infiltration using 2D Blood Brain Barrier Culture Model of Multiple Sclerosis

Voyvoda U., Karisik S. N., Reda M. D., Efe H., Cotuk ., Cakici B., et al.
6th International Molecular Immunology and Immunogenetics Congress (MIMIC-VI), İstanbul, Türkiye, 28 - 30 Nisan 2025, ss.1-2, (Özet Bildiri)

4. Discovery of Peptide-based Inhibitor Targeting the Human IL18:IL18Rα Complex

Düvenci Z. Ş., Timuçin A. C., Timuçin E.
6th INTERNATIONAL MOLECULAR IMMUNOLOGY & IMMUNOGENETICS CONGRESS (MIMIC-VI), İstanbul, Türkiye, 28 Nisan - 30 Mayıs 2025, ss.1-2, (Özet Bildiri)

5. Discovery of Peptide-based Inhibitor Targeting the Human IL18:IL18Rα Complex

Düvenci Z. Ş., Timuçin A. C., Timuçin E.
17th The International Symposium on Health Informatics and Bioinformatics (HIBIT), İstanbul, Türkiye, 18 - 20 Aralık 2024, ss.1-2, (Özet Bildiri)

6. Novel Approaches in Rational Peptide Design for Recognition of FABP3 and Myoglobin in Cardiac Biosensors

Karadeniz K. B., Şentürk B., Timuçin A. C., Kocagöz Z. T., Camadan E., Can Ö.
ODTU MEMS Center 3rd BioMEMS and Microfluidic Technologies Workshop, Ankara, Türkiye, 10 - 11 Haziran 2024, (Yayınlanmadı)

7. A rare case of uncharacterised autoinflammatory disease: patient carrying variations in NLRP3 and TNFRSF1A genes

Kılınç Ö. C., Gayibova K., Durucan İ., Özkılınç Önen M., Onat U. İ., Bülbül A., et al.
European Congress of Rheumatology, Vienna, Avusturya, 12 - 15 Haziran 2024, (Yayınlanmadı)

8. Genetic and Functional Activity Analyses of ADA2 in Patients with Deficiency of Adenosine Deaminase 2

Everest E., Ozkilinc Onen M., Demirci T., Timuçin A. C., Sahin S., Kasapcopur O., et al.
American Society of Human Genetics Annual Meeting, Washington, Amerika Birleşik Devletleri, 1 - 05 Kasım 2023, ss.258, (Özet Bildiri)

9. Classification of Variants in Systemic Autoinflammatory Diseases using 3D Structures and Protein-protein Interactions

Bülbül A., Timuçin E., Timuçin A. C., Sezerman O. U., Tahir Turanlı E.
American Society of Human Genetics Annual Meeting , Washington, Amerika Birleşik Devletleri, 1 - 05 Kasım 2023, ss.516, (Özet Bildiri)

10. Computational Design of RNA Based Modulators Targeting Maf-A protein for Multiple Myolema

Yıldırım Akdeniz G., Başağa S. H., Timuçin A. C.
Intelligient Systems for Molecular Biology/European Conference on Computational Biology 2023, Lyon, Fransa, 23 - 27 Temmuz 2023, (Yayınlanmadı)

11. Transkripsiyon faktörlerinin hedeflenmesi için yapı tabanlı peptit tasarımı, moleküler dinamik ve MM-PBSA çalışmaları

Timuçin A. C.
10.Ulusal Moleküler Biyoloji ve Biyoteknoloji Kongresi, İstanbul, Türkiye, 17 - 19 Aralık 2021, (Yayınlanmadı)

12. Computational design of a peptide targeting homodimerization of BACH2 BTB domain using molecular dynamics and MM-PBSA studies

Timuçin A. C.
4th International Eurasian Conference on Biological and Chemical Sciences (EurasianBioChem 2021), Ankara, Türkiye, 24 - 26 Kasım 2021, ss.1-2, (Özet Bildiri)

13. Molecular dynamics and MM-PBSA based relative binding free energy prediction studies for identification of novel amino acids and nucleic acids governing the interaction between transcription factor NFAT5 and its target consensus DNA sequence

Timuçin A. C.
10th International Molecular Biology and Biotechnology Congress, İstanbul, Türkiye, 4 - 08 Ekim 2021, ss.1, (Özet Bildiri)

14. Early biomarkers for the anti-angiogenic and anti-thmor activity of the superoxide dismutase 1 (SOD1) inhibitor tetrathiomolybdate

Braunstein M. J., Smith E., Timucin C., Donate F., Juarez J. C., Burnett M., et al.
49th Annual Meeting of the American-Society-of-Hematology, Georgia, Amerika Birleşik Devletleri, 8 - 11 Aralık 2007, cilt.110, (Özet Bildiri) identifier

15. Differential effects of Hsp70 inhibition within the tumor and microenvironment in multiple myeloma.

Braunstein M. J., Liu N., Klueppelberg U., Scott C., Behrman S., Tamucin C., et al.
48th Annual Meeting of the American-Society-of-Hematology, Florida, Amerika Birleşik Devletleri, 9 - 12 Aralık 2006, cilt.108, (Özet Bildiri) identifier
Metrikler

Yayın

43

Yayın (WoS)

20

Yayın (Scopus)

18

Atıf (WoS)

210

H-İndeks (WoS)

7

Atıf (Scopus)

256

H-İndeks (Scopus)

7

Atıf (Scholar)

310

H-İndeks (Scholar)

7

Proje

14

Fikri Mülkiyet

4

Tez Danışmanlığı

11

Açık Erişim

3
BM Sürdürülebilir Kalkınma Amaçları