Prof. Dr. GÜNSELİ BAYRAM AKÇAPINAR

Yayın Ağı

Makaleler 25

1. Phenogenomics reveals the ecology and evolution of Trichoderma fungi for sustainable agriculture

Steindorff A. S., Cai F. M., Ding M., Jiang S., Atanasova L., Baker S. E., et al.

Nature Microbiology , cilt.11, sa.3, ss.815-831, 2026 (SCI-Expanded, Scopus)

2. Unmasking genetic etiologies in neurodevelopmental disorders characterized by Cerebral Palsy: insights from integrative genomic approaches

Yigit A., AKGÜN DOĞAN Ö., ÖZKESERLİ Z., BAYRAM AKÇAPINAR G., Ayta S., Gencpinar P., et al.

Frontiers in Neurology , cilt.17, 2026 (SCI-Expanded, Scopus)

3. A Novel Homozygous Missense SCUBE3 Variant with Protein Modeling in a Patient Diagnosed as Short Stature, Facial Dysmorphism, and Skeletal Anomalies with or without Cardiac Anomalies 2.

Yeter B., Sezgin B. I., DİLEK Y. E., Kendir Demirkol Y., Selamioǧlu A., Klrmlzlbekmez H., et al.

Molecular syndromology , cilt.16, sa.5, ss.507-516, 2025 (SCI-Expanded, Scopus)

4. Molecular Consequences of CCN6 Variants Encoding WISP3 in Progressive Pseudorheumatoid Dysplasia

Guven Tasbicen G., Tufan A., Savsar B., Bulbul A. A., Tonbul Z., Guzel E., et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES , cilt.26, ss.1-33, 2025 (SCI-Expanded, Scopus)

5. Defining a genetic background for bamboo spine and Axial spondyloarthritis

Çolakoğlu Özkaya Ş., Abacar K. Y., Dilek Y. E., Bayram Akçapinar G., Atagündüz M. P., Erzik C.

JOINT BONE SPINE , cilt.0, sa.0, ss.1-20, 2025 (SCI-Expanded, Scopus)

6. CCHFV vaccine development, current challenges, limitations, and future directions

Ahata B., BAYRAM AKÇAPINAR G.

FRONTIERS IN IMMUNOLOGY , cilt.14, 2023 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

7. A new enrichment approach for candidate gene detection in unexplained recurrent pregnancy loss and implantation failure.

Berkay E. G., Şoroğlu C. V., Kalaycı T., Uyguner Z. O., Akçapınar G., Başaran S.

Molecular genetics and genomics : MGG , cilt.298, sa.1, ss.253-272, 2023 (SCI-Expanded, Scopus)

8. Genome of Pythium myriotylum Uncovers an Extensive Arsenal of Virulence-Related Genes among the Broad-Host-Range Necrotrophic Pythium Plant Pathogens

Daly P., Zhou D., Shen D., Chen Y., Xue T., Chen S., et al.

Microbiology spectrum , cilt.0, ss.226821, 2022 (SCI-Expanded, Scopus)

9. Hypomyelinating spastic dyskinesia and ichthyosis caused by a homozygous splice site mutation leading to exon skipping in ELOVL1.

Takahashi T., Mercan S., Sassa T., Akçapınar G., Yararbaş K., Süsgün S., et al.

Brain & development , cilt.44, sa.6, ss.391-400, 2022 (SCI-Expanded, Scopus)

10. The pleiotropic functions of Intracellular hydrophobins in aerial hyphae and fungal spores.

Cai F., Zhao Z., Gao R., Chen P., Ding M., Jiang S., et al.

PLoS genetics , cilt.17, sa.11, 2021 (SCI-Expanded, Scopus)

11. At least three families of hyphosphere small secreted cysteine-rich proteins can optimize surface properties to a moderately hydrophilic state suitable for fungal attachment.

Zhao Z., Cai F., Gao R., Ding M., Jiang S., Chen P., et al.

Environmental microbiology , cilt.23, sa.10, ss.5750-5768, 2021 (SCI-Expanded, Scopus)

12. From lignocellulose to plastics: Knowledge transfer on the degradation approaches by fungi.

Daly P., Cai F., Kubicek C. P., Jiang S., Grujic M., Rahimi M. J., et al.

Biotechnology advances , cilt.50, 2021 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

13. **Computational analysis of two arthritogenic peptides in complex with HLA-B27:05 and HLA-B27:09 associated with ankylosing spondylitis**

Kivrak S., Dilek Y. E., Kara I., Ozkaya S. C., ERZİK C., ATAGÜNDÜZ M. P., et al.

EUROPEAN JOURNAL OF IMMUNOLOGY , cilt.51, ss.403, 2021 (SCI-Expanded, Scopus)

14. Molecular dynamics analysis of ERAP1 and ERAP2 monomer, homodimer and heterodimers as relevant players in ankylosing spondylitis

Dilek Y. E., Kara I., Kivrak S., Ozkaya S. C., ERZİK C., ATAGÜNDÜZ M. P., et al.

EUROPEAN JOURNAL OF IMMUNOLOGY , cilt.51, ss.403, 2021 (SCI-Expanded, Scopus)

15. Evolutionary compromises in fungal fitness: hydrophobins can hinder the adverse dispersal of conidiospores and challenge their survival.

Cai F., Gao R., Zhao Z., Ding M., Jiang S., Yagtu C., et al.

The ISME journal , cilt.14, sa.10, ss.2610-2624, 2020 (SCI-Expanded, Scopus)

16. COMPARATIVE PHYSIOCHEMICAL ANALYSIS OF HYDROPHOBINS PRODUCED IN ESCHERICHIA COLI AND PICHIA PASTORIS

Przylucka A., Akcapinar G., Bonazza K., Mello-de-Sousa T. M., Mach-Aigner A. R., Lobanov V., et al.

COLLOIDS AND SURFACES B-BIOINTERFACES , cilt.159, ss.913-923, 2017 (SCI-Expanded, Scopus)

17. HFB7-A novel orphan hydrophobin of the Harzianum and Virens clades of Trichoderma, is involved in response to biotic and abiotic stresses

Przylucka A., Akcapinar G., Chenthamara K., Cai F., Grujic M., Karpenko J., et al.

FUNGAL GENETICS AND BIOLOGY , cilt.102, ss.63-76, 2017 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

18. Computational approaches for <i>de novo</i> design and redesign of metal-binding sites on proteins.

Akcapinar G., Sezerman O. U.

Bioscience reports , cilt.37, 2017 (SCI-Expanded, Scopus)

19. The neutral metallopeptidase NMP1 of Trichoderma guizhouense is required for mycotrophy and self-defence

Zhang J., Akcapinar G., Atanasova L., Rahimi M. J., Przylucka A., Yang D., et al.

ENVIRONMENTAL MICROBIOLOGY , cilt.18, sa.2, ss.580-597, 2016 (SCI-Expanded, Scopus)

20. Systems Biological Applications for Fungal Gene Expression

Akcapinar G., SEZERMAN O. U.

GENE EXPRESSION SYSTEMS IN FUNGI: ADVANCEMENTS AND APPLICATIONS , ss.385-393, 2016 (Hakemli Dergi)

21. Modulating the thermostability of Endoglucanase I from Trichoderma reesei using computational approaches

BAYRAM AKÇAPINAR G., Venturini A., Martelli P. L., Casadio R., Sezerman U. O.

PROTEIN ENGINEERING DESIGN & SELECTION , sa.5, ss.127-135, 2015 (SCI-Expanded, Scopus)

22. Molecular diversity of LysM carbohydrate-binding motifs in fungi

Akcapinar G., Kappel L., Sezerman O. U., Seidl-Seiboth V.

CURRENT GENETICS , cilt.61, sa.2, ss.103-113, 2015 (SCI-Expanded, Scopus)

23. Stress effects caused by the expression of a mutant cellobiohydrolase I and proteasome inhibition in Trichoderma reesei Rut-C30

Kautto L., Grinyer J., Paulsen I., Tetu S., Pillai A., Pardiwalla S., et al.

NEW BIOTECHNOLOGY , cilt.30, sa.2, ss.183-191, 2013 (SCI-Expanded, Scopus)

24. From in silico to in vitro: Modelling and production of Trichoderma reesei endoglucanase 1 and its mutant in Pichia pastoris

Akcapinar G., Gul O., Sezerman U. O.

JOURNAL OF BIOTECHNOLOGY , cilt.159, sa.1-2, ss.61-68, 2012 (SCI-Expanded, Scopus)

25. Effect of Codon Optimization on the Expression of Trichoderma reesei Endoglucanase 1 in Pichia pastoris

Akcapinar G., Gul O., Sezerman U.

BIOTECHNOLOGY PROGRESS , cilt.27, sa.5, ss.1257-1263, 2011 (SCI-Expanded, Scopus)

Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler 26

1. **Functional Investigation of Pathogenic Variants in CCN6 Causing Progressive Pseudorheumatoid Dysplasia**

GÜVEN TAŞBİÇEN G., Tonbul Z., Tufan A., Savsar B., Guzel E., BAYRAM AKÇAPINAR G., et al.

58th Conference of the European-Society-of-Human-Genetics (ESHG), Milan, İtalya, 24 - 27 Mayıs 2025, cilt.33, ss.409, (Özet Bildiri)

2. Unveiling the Protein Landscape in Cerebral Palsy Through AI-Based Structural Analysis

Özkeserli Z., Yiğit A., Akgün Doğan Ö., Bilgüvar K., Özbek U., Bayram Akçapinar G.

17th The International Symposium on Health Informatics and Bioinformatics, İstanbul, Türkiye, 18 - 20 Aralık 2024, ss.161, (Özet Bildiri)

3. Comparative in Silico Modelling of Two Novel Eurocin-like Antimicrobial Peptides from Ascomycota

Gündoğdu B., Dilek Y. E., Bayram Akçapinar G.

HIBIT2024 (17th International HIBIT Conference), İstanbul, Türkiye, 18 - 20 Aralık 2024, ss.82, (Özet Bildiri)

4. Metagenomic Analysis of Duodenal Bacterial and Fungal Microbiota in Obesity

Durmuş I., Bayram Akçapinar G., Süyen G.

HIBIT2024 (17th International HIBIT Conference), İstanbul, Türkiye, 18 - 20 Aralık 2024, ss.109, (Özet Bildiri)

5. Structural Insights into Obesity-Associated STEAP1B Variants Using Molecular Dynamics Simulations

Dilek Y. E., Tenay L., Onat O. E., Bayram Akçapinar G.

HIBIT2024 (17th International HIBIT Conference), İstanbul, Türkiye, 18 - 20 Aralık 2024, ss.85, (Özet Bildiri)

6. Unveiling the genetic diversity of cerebral palsy mimics using trio-WES in the Turkish cohort

Yigit A., AKGÜN DOĞAN Ö., BAYRAM AKÇAPINAR G., ÖZKESERLİ Z., Ayta S., HATIRNAZ NG Ö., et al.

57th Conference of the European-Society-of-Human-Genetics (ESHG), Berlin, Almanya, 1 - 04 Haziran 2024, cilt.32, ss.1503, (Özet Bildiri)

7. Evaluating the Performance of AlphaFold for Fungal Small Secreted Cysteine Rich Protein Structure Determination: A case for Trichoderma Hydrophobins

Özkeserli Z., Bayram Akçapınar G.

32nd Fungal Genetics Conference, California, Amerika Birleşik Devletleri, 12 - 17 Mart 2024, ss.327, (Özet Bildiri)

8. Functional and structural landscape of Cerebral Palsy (CP) related proteins

Özkeserli Z., Yiğit A., Akgün Doğan Ö., Bilgüvar K., Özbek U., Bayram Akçapınar G.

Applied Bioinformatics in Life Sciences (5th edition), Leuven, Belçika, 7 - 08 Mart 2024, ss.1, (Özet Bildiri)

9. Utilizing Exome Sequencing Data to Improve Diagnostic Yield in Turkish Cerebral Palsy Cohort

Akgün Doğan Ö., Bayram Akçapınar G., Hatırnaz Ng Ö., Özdemir Ö.

International Cerebral Palsy Consortium Meeting, Glasgow, İngiltere, 09 Haziran 2023, (Yayınlanmadı)

10. Komatagaella phaffii: A Modern Cell Factory for Producing Cysteine-Rich Antimicrobial Fungal Proteins and AI-Predicted Cysteine Rich Peptides

Bayram Akçapınar G.

16th European Conference on Fungal Genetics (ECFG16)), Innsbruck, Avusturya, 5 - 08 Mart 2023, ss.539-540, (Özet Bildiri) Sürdürülebilir Kalkınma

11. Molecular Dynamics Analysis of ERAP1 and ERAP2 Monomer, Homodimer and Heterodimers as Relevant Players in Ankylosing Spondylitis

Dilek Y. E., Kara İ., Kıvrak S., Çolakoğlu Özkaya Ş., Erzik C., Atagündüz M. P., et al.

6th European Congress on Immunology (ECI2021), İstanbul, Türkiye, 1 - 04 Eylül 2021, ss.0-1, (Özet Bildiri)

12. **Computational Analysis of Two Arthritogenic Peptides in Complex with HLA-B27:05 and HLA-B27:09 Associated with Ankylosing Spondylitis**

Kıvrak S., Dilek Y. E., Kara İ., Çolakoğlu Özkaya Ş., Erzik C., Atagündüz M. P., et al.

6th European Congress on Immunology (ECI2021), İstanbul, Türkiye, 1 - 04 Eylül 2021, ss.0-1, (Özet Bildiri)

13. A Comparative Molecular Dynamics (MD) Analysis of a Fungal Hydrophobin (RodA) Behavior at Air/Water Interfaces

Kara İ., Bayram Akçapınar G.

EFB2021 Virtual Conference., 10 - 14 Mayıs 2021, (Özet Bildiri)

14. Deep Learning for Antimicrobial Peptide Recognition: Application to Trichoderma reesei Genome

Soykam H. O., Doğan T., Ünsal S., Bayram Akçapınar G.

EFB2021 Virtual Conference , 10 - 14 Mayıs 2021, (Özet Bildiri)

15. Pichia pastoris as a versatile host for recombinant production of antifungal peptide ‘’PAF’’ from Penicillium chrysogenum

Örçen A., Bayram Akçapınar G.

Pichia 2021, 24 Mart - 01 Nisan 2021, (Özet Bildiri)

16. Rational design of novel Trichoderma hydrophobins for industrial applications

BAYRAM AKÇAPINAR G., PRZYLUCKA A., Cai F., Mello De Sousa T. M., Grothe H., Reimhult E., et al.

13th European Conference on Fungal Genetics, ECFG13, Paris, Fransa, 3 - 06 Nisan 2016

17. Hydrophobins of Trichoderma guizhouense inhibit tomato defence system for successful colonization of rhizosphere

Cai F., BAYRAM AKÇAPINAR G., Pryzlucka A., Pang G., Qirong S., Druzhinina I. S.

13th European Conference on Fungal Genetics, ECFG13, Paris, Fransa, 3 - 06 Nisan 2016

18. Hydrophobins of Trichoderma as immobilizers of enzymes on polymeric surfaces for biocatalysis

Pryzlucka A., BAYRAM AKÇAPINAR G., Boraca M., Kubicek C. P., Druzhinina I. S.

Biotrans 2015, Viyana, Avusturya, 26 - 30 Temmuz 2015

19. Modulation of surface properties of materials by engineered hydrophobins for effective biocatalysis

BAYRAM AKÇAPINAR G., Pryzlucka A., Cai F., Shen Q., Kubicek C. P., Druzhinina I. S.

Biotrans 2015, Viyana, Avusturya, 26 - 30 Temmuz 2015

20. From in silico to in vitro Modelling and production of Trichoderma reesei endoglucanase 1 mutants in Pichia pastoris for textile biofinishing

BAYRAM AKÇAPINAR G., GÜL Ö., SEZERMAN O. U.

III International Conference on Environmental, Industrial and Applied Microbiology “ (BioMicroWorld2009), Lizbon, Portekiz, 2 - 04 Aralık 2009

21. Cloning of T reesei Cellulase Components in P pastoris and Impact of Loop Mutations on EGI of T reesei

BAYRAM AKÇAPINAR G., GÜL Ö., SEZERMAN O. U.

International Enzyme Engineering Symposium (IEES’08), Aydın, Türkiye, 1 - 05 Ekim 2008

22. Impact of mutations on thermal stability of T reesei EGII a computational study

BAYRAM AKÇAPINAR G., Sezerman A. Ö., SEZERMAN O. U.

13th European Congress on Biotechnology (Symbiosis), Barcelona, İspanya, 16 - 19 Eylül 2007, cilt.131, ss.259-260

23. Immobilized Glucose Oxidase GOD for better stability and reuse in biobleaching of textiles

BAYRAM AKÇAPINAR G., DAVULCU A., SEZERMAN A. Ö., Taralp A., SEZERMAN O. U., ANİŞ P., et al.

7th International Symposium on Biocatalysis and Biotransformations (BIOTRANS 2005), Delft, Hollanda, 3 - 08 Temmuz 2005

24. Immobilized Glucose Oxsidase for Better Stability and Reuse in Biobleaching of Textiles

GÜNSELİ A., DAVULCU A., SEZERMAN O. U., TARALP A., ANİŞ P., EREN H. A., et al.

7th International Symposium on Biocatalysis and biotransformations, Delf, Hollanda, 3 - 08 Temmuz 2005, ss.75

25. Use of cellulase jeffamine networks in place of the free enzyme may alleviate the problem of lost fiber strength during textile processing

BAYRAM AKÇAPINAR G., Duran K., Körlü Ekmekçi A., BAHTİYARİ M. İ., Taralp A., SEZERMAN O. U.

229th National Meeting of the American-Chemical-Society, San Diego, Amerika Birleşik Devletleri, 13 - 17 Mart 2005

26. Treatment of viscose with crosslinked commercial cellulases

BAYRAM AKÇAPINAR G., Duran K., BAHTİYARİ M. İ., Körlü Ekmekçi A., Taralp A., SEZERMAN O. U.

3rd International Conference on Textile Biotechnology (INTB04), Graz, Avusturya, 13 - 16 Haziran 2004

Kitaplar 4

Metrikler

Yayın

Yayın (WoS)

Yayın (Scopus)

Atıf (WoS)

532

H-İndeks (WoS)

Atıf (Scopus)

606

H-İndeks (Scopus)

Atıf (Sobiad)

H-İndeks (Sobiad)

Proje

Fikri Mülkiyet

Tez Danışmanlığı

Açık Erişim

BM Sürdürülebilir Kalkınma Amaçları

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