Prof. Dr. MEHMET BATU ERMAN

Yayın Ağı

Makaleler 50

1. Structure and Function of the LRBA Protein

Ezen E., Catak M. C., Catak F. B., Piepoli S., Zahedimaram P., Ultanir E., et al.

TURKISH JOURNAL OF IMMUNOLOGY , ss.37-46, 2024 (ESCI, Scopus, TRDizin)

2. Dimerization choice and alternative functions of ZBTB transcription factors

Barakat S., Ezen E., Devecioglu I., Gezen M., Piepoli S., ERMAN M. B.

FEBS JOURNAL , cilt.291, sa.2, ss.237-255, 2024 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

3. Evaluation of Clinical and Immunological Alterations Associated with ICF Syndrome

Bilgic Eltan S., Nain E., Catak M. C., Ezen E., Sefer A. P., Karimi N., et al.

JOURNAL OF CLINICAL IMMUNOLOGY , cilt.44, sa.1, 2024 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

4. Expression and characterization of recombinant IL-1Ra in Aspergillus oryzae as a system

Azar L. M., KARAMAN E., Beyaz B., Goktan I., Eyupoglu A. E., Kizilel S., et al.

BMC BIOTECHNOLOGY , cilt.23, sa.1, 2023 (SCI-Expanded, Scopus)

5. Human ACE2 orthologous peptide sequences show better binding affinity to SARS-CoV-2 RBD domain: Implications for drug design

Azar L. M., Oncel M. M., KARAMAN E., Soysal L. F., FATIMA A., Choi S. B., et al.

COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL , cilt.21, ss.4096-4109, 2023 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

6. Sibling rivalry among the ZBTB transcription factor family: homodimers versus heterodimers

Piepoli S., Barakat S., Nogay L., Simsek B., Akkose U., Taskiran H., et al.

LIFE SCIENCE ALLIANCE , cilt.5, sa.11, 2022 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

7. Reversal of the T cell immune system reveals the molecular basis for T cell lineage fate determination in the thymus

Shinzawa M., Moseman E. A., Gossa S., Mano Y., Bhattacharya A., Guinter T., et al.

NATURE IMMUNOLOGY , cilt.23, sa.5, ss.731-742, 2022 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

8. Nanobodies as molecular imaging probes

Barakat S., Berksoz M., Zahedimaram P., Piepoli S., ERMAN M. B.

FREE RADICAL BIOLOGY AND MEDICINE , cilt.182, ss.260-275, 2022 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

9. Targeting mitochondrial DNA polymerase gamma for selective inhibition of MLH1 deficient colon cancer growth

Somuncu B., Ekmekcioglu A., Antmen F. M., Ertuzun T., Deniz E., Keskin N., et al.

PLOS ONE , cilt.17, sa.6, 2022 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

10. The mechanism of LRBA dependent CTLA-4 surface expression in regulatory T cell lymphocytes

Zahedimaram P., ERMAN M. B., Baris S.

EUROPEAN JOURNAL OF IMMUNOLOGY , ss.359, 2021 (SCI-Expanded, Scopus)

11. Sibling rivalry among the ZBTB transcription factor family: homo vs heterodimerization

Piepoli S., Akkose U., Nogay L., Taskiran H., Tolay N., Gezen M., et al.

EUROPEAN JOURNAL OF IMMUNOLOGY , ss.67, 2021 (SCI-Expanded, Scopus)

12. Synchronous and Asynchronous Response in Dynamically Perturbed Proteins

Hacisuleyman A., Erkip A., ERMAN M. B., Erman B.

JOURNAL OF PHYSICAL CHEMISTRY B , cilt.125, sa.3, ss.729-739, 2021 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

13. Structural analysis of the PATZ1 BTB domain homodimer

Piepoli S., Alt A. O., Atilgan C., Mancini E. J., ERMAN M. B.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY , cilt.76, ss.581-593, 2020 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

14. Engineering antigen-specific natural killer cells against the melanoma-associated antigen tyrosinase via TCR gene transfer.

Parlar A., Sayitoglu E. C., Pamukcu C., Georgoudaki A., Ozkazanc D., Aras M., et al.

CANCER IMMUNOLOGY RESEARCH , sa.4, ss.49-50, 2020 (SCI-Expanded, Scopus)

15. p53 regulates katanin-p60 promoter in HCT 116 cells

Kirimtay K., Selcuk E., Kelle D., ERMAN M. B., Karabay Korkmaz A.

GENE , cilt.727, 2020 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

16. Molecular Biology of SARS-CoV-2

Piepoli S., Shamloo B., Bircan A., Adebali O., ERMAN M. B.

TURKISH JOURNAL OF IMMUNOLOGY , cilt.8, sa.2, ss.73-88, 2020 (ESCI, Scopus, TRDizin) Sürdürülebilir Kalkınma

17. Doxorubicin inhibits miR-140 expression and upregulates PD-L1 expression in HCT116 cells,opposite to its effects on MDA-MB-231 cells

Naba N. M., Tolay N., ERMAN M. B., Sayı Yazgan A.

TURKISH JOURNAL OF BIOLOGY , cilt.44, sa.1, ss.15-23, 2020 (SCI-Expanded, Scopus, TRDizin) Sürdürülebilir Kalkınma

18. The fungal metabolite chaetocin is a sensitizer for pro-apoptotic therapies in glioblastoma

Ozyerli-Goknar E., Sur-Erdem I., Seker F., CİNGÖZ A., Kayabolen A., Kahya-Yesil Z., et al.

CELL DEATH & DISEASE , cilt.10, 2019 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

19. Approaches to functionally validate candidate genetic variants involved in colorectal cancer predisposition

Bonjoch L., Mur P., Arnau-Collell C., Vargas-Parra G., Shamloo B., Franch-Exposito S., et al.

MOLECULAR ASPECTS OF MEDICINE , cilt.69, ss.27-40, 2019 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

20. Engineering antigen-specific NK cell lines against the melanoma-associated antigen tyrosinase via TCR gene transfer

Parlar A., Sayitoglu E. C., Ozkazanc D., Georgoudaki A., Pamukcu C., Aras M., et al.

EUROPEAN JOURNAL OF IMMUNOLOGY , sa.8, ss.1278-1290, 2019 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

21. Nanocomposite Bioinks Based on Agarose and 2D Nanosilicates with Tunable Flow Properties and Bioactivity for 3D Bioprinting

Nadernezhad A., Caliskan O. S., Topuz F., Afghah F., ERMAN M. B., Koc B.

ACS APPLIED BIO MATERIALS , cilt.2, sa.2, ss.796-806, 2019 (ESCI, Scopus) Sürdürülebilir Kalkınma

22. Identification of lineage-specifying cytokines that signal all CD8+-cytotoxic-lineage-fate decisions in the thymus

Etzensperger R., Kadakia T., Tai X., Alag A., Guinter T. I., Egawa T., et al.

NATURE IMMUNOLOGY , cilt.18, sa.11, ss.1218-1227, 2017 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

23. Long noncoding RNA (lincRNA), a new paradigm in gene expression control

Deniz E., ERMAN M. B.

FUNCTIONAL & INTEGRATIVE GENOMICS , cilt.17, sa.2-3, ss.135-143, 2017 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

24. Screening of new antileukemic agents from essential oils of algae extracts and computational modeling of their interactions with intracellular signaling nodes

Ataseyer-Arslan B., Yilancioglu K., Kalkan Z., Timucin A. C., Gur H., Isik F. B., et al.

EUROPEAN JOURNAL OF PHARMACEUTICAL SCIENCES , ss.120-131, 2016 (SCI-Expanded) Sürdürülebilir Kalkınma

25. Antileukemic Drug Potentials of Essential Oils of Algea Extracts

Arslan B. A., Yilancioglu K., Kalkan Z., Atalay V. E., Gur H., Isik F. B., et al.

ACTA PHYSIOLOGICA , ss.15, 2015 (SCI-Expanded, Scopus)

26. PATZ1 Is a DNA Damage-Responsive Transcription Factor That Inhibits p53 Function

Keskin N., Deniz E., Eryilmaz J., Un M., Batur T., Ersahin T., et al.

MOLECULAR AND CELLULAR BIOLOGY , sa.10, ss.1741-1753, 2015 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

27. Oxidative Stress Is a Mediator for Increased Lipid Accumulation in a Newly Isolated Dunaliella salina Strain

Yilancioglu K., Cokol M., Pastirmaci I., ERMAN M. B., Cetiner S.

PLOS ONE , cilt.9, sa.3, 2014 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

28. Foxp3 Transcription Factor Is Proapoptotic and Lethal to Developing Regulatory T Cells unless Counterbalanced by Cytokine Survival Signals

Tai X., ERMAN M. B., Alag A., Mu J., Kimura M., Katz G., et al.

IMMUNITY , cilt.38, sa.6, ss.1116-1128, 2013 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

29. Effects of micro environmental factors on natural killer activity (NK) of Beta Thalassemia major patients

Arslan B. A., Erdem-Kuruca S., KARAKAŞ Z., ERMAN M. B., ERGEN H. A.

CELLULAR IMMUNOLOGY , cilt.282, sa.2, ss.93-99, 2013 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

30. Cd81 Interacts with the T Cell Receptor to Suppress Signaling

Cevik S. I., Keskin N., Belkaya S., Ozlu M. I., Deniz E., Tazebay U. H., et al.

PLOS ONE , sa.11, 2012 (SCI-Expanded, Scopus)

31. Conditional deletion of cytokine receptor chains reveals that IL-7 and IL-15 specify CD8 cytotoxic lineage fate in the thymus

McCaughtry T. M., Etzensperger R., Alag A., Tai X., Kurtulus S., Park J., et al.

JOURNAL OF EXPERIMENTAL MEDICINE , cilt.209, sa.12, ss.2263-2276, 2012 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

32. CD8 Lineage-specific Regulation of Interleukin-7 Receptor Expression by the Transcriptional Repressor Gfi1

Ligons D. L., Tuncer C., Linowes B. A., Akcay I. M., Kurtulus S., Deniz E., et al.

JOURNAL OF BIOLOGICAL CHEMISTRY , cilt.287, sa.41, ss.34386-34399, 2012 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

33. Coreceptor gene imprinting governs thymocyte lineage fate

Adoro S., McCaughtry T., ERMAN M. B., Alag A., Van Laethem F., Park J., et al.

EMBO JOURNAL , cilt.31, sa.2, ss.366-377, 2012 (SCI-Expanded, Scopus)

34. Signaling by intrathymic cytokines, not T cell antigen receptors, specifies CD8 lineage choice and promotes the differentiation of cytotoxic-lineage T cells

Park J., Adoro S., Guinter T., ERMAN M. B., Alag A. S., Catalfamo M., et al.

NATURE IMMUNOLOGY , cilt.11, sa.3, ss.257-264, 2010 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

35. Interleukin 7 signaling in dendritic cells regulates the homeostatic proliferation and niche size of CD4+ T cells

Guimond M., Veenstra R. G., Grindler D. J., Zhang H., Cui Y., Murphy R. D., et al.

NATURE IMMUNOLOGY , cilt.10, sa.2, ss.149-157, 2009 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

36. Targeting CD4 Coreceptor Expression to Postselection Thymocytes Reveals That CD4/CD8 Lineage Choice Is neither Error-Prone nor Stochastic

Adoro S., ERMAN M. B., Sarafova S. D., Van Laethem F., Park J., Feigenbaum L., et al.

JOURNAL OF IMMUNOLOGY , cilt.181, sa.10, ss.6975-6983, 2008 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

37. 'Coreceptor tuning': cytokine signals transcriptionally tailor CD8 coreceptor expression to the self-specificity of the TCR

Park J., Adoro S., Lucas P. J., Sarafova S. D., Alag A. S., Doan L. L., et al.

NATURE IMMUNOLOGY , cilt.8, sa.10, ss.1049-1059, 2007 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

38. Coreceptor signal strength regulates positive selection but does not determine CD4/CD8 lineage choice in a physiologic in vivo model

ERMAN M. B., Alag A. S., Dahle O., van Laethem F., Sarafova S. D., Guinter T. I., et al.

JOURNAL OF IMMUNOLOGY , cilt.177, sa.10, ss.6613-6625, 2006 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

39. Cytokine signal transduction is suppressed in preselection double-positive thymocytes and restored by positive selection

Yu Q., Park J., Doan L., ERMAN M. B., Feigenbaum L., Singer A.

JOURNAL OF EXPERIMENTAL MEDICINE , cilt.203, sa.1, ss.165-175, 2006 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

40. Modulation of coreceptor transcription during positive selection dictates lineage fate independently of TCR/coreceptor specificity

Sarafova S., ERMAN M. B., Yu Q., Van Laethem F., Guinter T., Sharrow S., et al.

IMMUNITY , cilt.23, sa.1, ss.75-87, 2005 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

41. IL-7 receptor signals inhibit expression of transcription factors TCF-1, LEF-1, and RORγt:: Impact on thymocyte development

Yu Q., ERMAN M. B., Park J., Feigenbaum L., Singer A.

JOURNAL OF EXPERIMENTAL MEDICINE , cilt.200, sa.6, ss.797-803, 2004 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

42. Suppression of IL7Rα transcription by IL-7 and other prosurvival cytokines:: A novel mechanism for maximizing IL-7-dependent T cell survival

Park J., Yu Q., ERMAN M. B., Appelbaum J., Montoya-Durango D., Grimes J., et al.

IMMUNITY , cilt.21, sa.2, ss.289-302, 2004 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

43. Defined αβ T cell receptors with distinct ligand specificities do not require those ligands to signal double negative thymocyte differentiation

ERMAN M. B., Guinter T., Singer A.

JOURNAL OF EXPERIMENTAL MEDICINE , cilt.199, sa.12, ss.1719-1724, 2004 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

44. In vitro evidence that cytokine receptor signals are required for differentiation of double positive thymocytes into functionally mature CD8+ T cells

Yu Q., ERMAN M. B., Bhandoola A., Sharrow S., Singer A.

JOURNAL OF EXPERIMENTAL MEDICINE , cilt.197, sa.4, ss.475-487, 2003 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

45. Early TCRα expression generates TCR complexes that signal the DN-to-DP transition and impair development

ERMAN M. B., Feigenbaum L., Coligan J., Singer A.

NATURE IMMUNOLOGY , cilt.3, sa.6, ss.564-569, 2002 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

46. Transcriptional activation by ETS and leucine zipper-containing basic helix-loop-helix proteins

Tian G., Erman B., Ishii H., Gangopadhyay S., Sen R.

MOLECULAR AND CELLULAR BIOLOGY , cilt.19, sa.4, ss.2946-2957, 1999 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

47. ETS-core binding factor: a common composite motif in antigen receptor gene enhancers

Erman B., Cortes M., Nikolajczyk B., Speck N., Sen R.

MOLECULAR AND CELLULAR BIOLOGY , cilt.18, sa.3, ss.1322-1330, 1998 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

48. Context dependent transactivation domains activate the immunoglobulin mu heavy chain gene enhancer

Erman B., Sen R.

EMBO JOURNAL , cilt.15, sa.17, ss.4665-4675, 1996 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

49. REGULATION OF LYMPHOID-SPECIFIC IMMUNOGLOBULIN-MU HEAVY-CHAIN GENE ENHANCER BY ETS-DOMAIN PROTEINS

NELSEN B., TIAN G., ERMAN B., GREGOIRE J., MAKI R., GRAVES B., et al.

SCIENCE , sa.5117, ss.82-86, 1993 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

50. INFORMATION-THEORETICAL ENTROPY AS A MEASURE OF SEQUENCE VARIABILITY

SHENKIN P., ERMAN B., MASTRANDREA L.

PROTEINS-STRUCTURE FUNCTION AND GENETICS , cilt.11, sa.4, ss.297-313, 1991 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler 9

1. Isolation and characterization of nanobodies that bind the BTB domain of the PATZ1 transcription factor

Barakat S., De Marko A., ERMAN M. B.

6th European Congress of Immunology (ECI), ELECTR NETWORK, 1 - 04 Eylül 2021, ss.412, (Özet Bildiri)

2. Identification and strategic targeting of key anti-viral defense mechanisms in Natural Killer cells

Sayitoglu E. C., Ozkazanc D., Sarac A., Parlar A., Alici E., ERMAN M. B., et al.

Annual Meeting of the American-Association-of-Immunologists (AAI), Texas, Amerika Birleşik Devletleri, 4 - 08 Mayıs 2018, (Özet Bildiri)

3. Engineering antigen-specific NK cells via TCR gene transfer: A novel source for adoptive immunotherapy

Parlar A., Pamukcu C., Ozkazanc D., Aras M., Dahlberg C., Chrobok M., et al.

European-Society-of-Gene-and-Cell-Therapy (ESCGT) Congress, Berlin, Almanya, 01 Ocak 2017, (Özet Bildiri)

4. Editing of Long Noncoding RNA DANCR Gene Locus Using Genetic Engineering Tools

Baran G., Talug B., Keskin N., TOKCAER KESKİN Z., ERMAN M. B., Deniz E.

21st National Biomedical Engineering Meeting (BIYOMUT), İstanbul, Türkiye, 24 Kasım - 26 Aralık 2017, (Tam Metin Bildiri)

5. Characterization of PATZ1 protein structure and its interaction with the tumor suppressor protein p53

Piepoli S., ERMAN M. B., Atilgan C.

41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Türkiye, 3 - 08 Eylül 2016, ss.84, (Özet Bildiri)

6. Innate immune sensors restrict lentiviral gene delivery to human natural killer cells: novel perspectives on the use of viral vectors

Sayitoglu E. C., Duru A. D., Chrobok M., Chiang C., Parlar A., Senturk G. H., et al.

Collaborative Congress of the European-Society-of-Gene-and-Cell-Therapy (ESGCT) and Finnish-Society-of-Gene-Therapy (FSGT), Helsinki, Finlandiya, 17 - 20 Eylül 2015, (Özet Bildiri)

7. NATURAL KILLER ACTIVITY AND EFFECT OF IL-2 IN PATIENTS WITH β-THALASSEMIA MAJOR

KARAKAŞ Z., Atasever B., Kuruca S. E., ERMAN M. B., ERGEN H. A., Isbir T., et al.

14th Annual Meeting of the European-Hematology-Association, Berlin, Almanya, 4 - 07 Haziran 2009, ss.502, (Özet Bildiri)

8. PHENOTYPIC AND FUNCTIONAL STUDIES OF NATURAL KILLER (NK) CELL SUBSETS IN β-THALASSEMIA MAJOR PATIENTS

Atasever B., Kuruca S. E., KARAKAŞ Z., ERMAN M. B., ERGEN H. A., Isbir T., et al.

14th Annual Meeting of the European-Hematology-Association, Berlin, Almanya, 4 - 07 Haziran 2009, ss.500-501, (Özet Bildiri)

9. Coreceptor tuning: IL-7 signals transcriptionally tailor CD8 coreceptor expression in CD8 T cells to the self-specificity of their TCR

Park J., Adoro S., Lucas P. J., Sarafova S. D., Alag A., Doan L. L., et al.

15th Annual Meeting of the International-Cytokine-Society, San-Francisco, Kostarika, 26 - 30 Ekim 2007, ss.32, (Özet Bildiri) Sürdürülebilir Kalkınma

Metrikler

Yayın

Yayın (WoS)

Yayın (Scopus)

Atıf (WoS)

1395

H-İndeks (WoS)

Atıf (Scopus)

2754

H-İndeks (Scopus)

Atıf (Scholar)

2304

H-İndeks (Scholar)

Proje

Fikri Mülkiyet

Tez Danışmanlığı

Açık Erişim

BM Sürdürülebilir Kalkınma Amaçları

Yayınlar & Eserler