Publications

Articles

An Investigation Into the Impact of Impedance Measurement Parameters on the Limit of Detection of QCM-D Using Machine Learning Model Chaining

KIRIMLI C. E., KIRIMLI E. E., Yuksel M. M., Tugtag S. Y.
IEEE SENSORS JOURNAL, vol.25, no.3, pp.5688-5696, 2025 (SCI-Expanded, Scopus) identifier identifier

Small world properties of schizophrenia and OCD patients derived from fNIRS based functional brain network connectivity metrics

AKIN A., Yorgancıgil E., Öztürk O. C., SÜTÇÜBAŞI B., KIRIMLI C. E., Elgün Kırımlı E. E., et al.
SCIENTIFIC REPORTS, vol.14, no.1, 2024 (SCI-Expanded, Scopus) Sustainable Development identifier identifier identifier

Awareness and level of digital literacy among students receiving health-based education

Aydınlar A., Mavi A., Kütükçü E., KIRIMLI E. E., ALİS D. C., AKIN A., et al.
BMC Medical Education, vol.24, no.1, 2024 (SCI-Expanded, SSCI, Scopus) identifier identifier

Hydrogel-Integrated Heart-on-a-Chip Platform for Assessment of Myocardial Ischemia Markers

Ates B., Eroglu T., Sahsuvar S., KIRIMLI C. E., Kocaturk O., SENAY S., et al.
ACS Omega, vol.9, no.41, pp.42103-42115, 2024 (SCI-Expanded, Scopus) identifier identifier

A Novel Peptide-Based Detection of SARS-CoV-2 Antibodies

Bulut A., Temur B. Z., Kirimli C. E., Gok Ö., Balcioglu B. K., Ozturk H. U., et al.
BIOMIMETICS, vol.8, no.1, 2023 (SCI-Expanded, Scopus) Sustainable Development identifier identifier identifier

A Comparison of Impedance and Antenna Analyzers on the Basis of Machine Learning Assisted Limit of Detection Experiments

Kırımlı E. E., Kırımlı C. E.
2022-International Workshop on Impedance Spectroscopy (IWIS), vol.1, no.1, pp.61-65, 2022 (Conference Book)

Machine learning approach to optimization of parameters for impedance measurements of Quartz Crystal Microbalance to improve limit of detection

KIRIMLI C. E., Elgun E. E., Unal U.
Biosensors and Bioelectronics: X, vol.10, 2022 (Scopus) identifier

Rapid, label-free genetic detection of enteropathogens in stool without genetic isolation or amplification

Han S., SOYLU M. Ç., KIRIMLI C. E., Wu W., Sen B., Joshi S. G., et al.
BIOSENSORS & BIOELECTRONICS, vol.130, pp.73-80, 2019 (SCI-Expanded, Scopus) identifier identifier identifier identifier

In situ, amplification-free double-stranded mutation detection at 60 copies/ml with thousand-fold wild type in urine

Kirimli C. E., Lin S., Su Y., Shih W., Shih W. Y.
BIOSENSORS & BIOELECTRONICS, vol.119, pp.221-229, 2018 (SCI-Expanded, Scopus) Sustainable Development identifier identifier identifier

Piezoelectric Plate Sensor (PEPS) for Analysis of Specific KRAS Point Mutations at Low Copy Number in Urine Without DNA Isolation or Amplification

Kirimli C. E., Shih W., Shih W. Y.
BIOSENSORS AND BIODETECTION: METHODS AND PROTOCOLS, VOL 2: ELECTROCHEMICAL, BIOELECTRONIC, PIEZOELECTRIC, CELLULAR AND MOLECULAR BIOSENSORS, 2ND EDITION, vol.1572, pp.327-348, 2017 (SCI-Expanded, Scopus) identifier identifier

Amplification-free in situ KRAS point mutation detection at 60 copies per mL in urine in a background of 1000-fold wild type

Kirimli C. E., Shih W., Shih W. Y.
ANALYST, vol.141, no.4, pp.1421-1433, 2016 (SCI-Expanded, Scopus) identifier identifier identifier

Specific in situ hepatitis B viral double mutation (HBVDM) detection in urine with 60 copies ml(-1) analytical sensitivity in a background of 250-fold wild type without DNA isolation and amplification

Kirimli C. E., Shih W., Shih W. Y.
ANALYST, vol.140, no.5, pp.1590-1598, 2015 (SCI-Expanded, Scopus) Sustainable Development identifier identifier identifier

DNA hybridization detection with 100 zM sensitivity using piezoelectric plate sensors with an improved noise-reduction algorithm

Kirimli C. E., Shih W., Shih W. Y.
ANALYST, vol.139, no.11, pp.2754-2763, 2014 (SCI-Expanded, Scopus) identifier identifier identifier

Real-time, in situ DNA hybridization detection with attomolar sensitivity without amplification using (pb(Mg1/3Nb2/3)O-3)(0.65)-(PbTiO3)(0.35) piezoelectric plate sensors

Wu W., Kirimli C. E., Shih W., Shih W. Y.
BIOSENSORS & BIOELECTRONICS, vol.43, pp.391-399, 2013 (SCI-Expanded, Scopus) identifier identifier identifier

Temperature- and flow-enhanced detection specificity of mutated DNA against the wild type with reporter microspheres

Kirimli C. E., Shih W., Shih W. Y.
ANALYST, vol.138, no.20, pp.6117-6126, 2013 (SCI-Expanded, Scopus) Sustainable Development identifier identifier identifier

Papers Published in Refereed Scientific Meetings

Exploratory Data Analysis of Bulk Fluid Viscosity Measurements by Means of Quartz Cyrstal Microbalance Impedance Analysis

Kırımlı C. E., Kırımlı E. E.
2024 International Workshop on Impedance Spectroscopy (IWIS) , Chemnitz, Germany, 24 - 27 September 2024, pp.49-53, (Full Text)

Performance Comparison Of 2 Different Battery Powered Mobile Antenna Analyzers And One Dedicated Mobile Open Source Qcm Platform

Kırımlı C. E., Bulut A.
2. Biyomedikal Mühendisliğinde Yenilikler Kongresi, İzmir, Turkey, 18 - 19 September 2020, pp.1-5, (Full Text)

Wireless Readout System Modeling for Electrodeless QCM

Sari A., Batur O. Z., Kirimli C. E.
16th International Conference on Synthesis, Modeling, Analysis and Simulation Methods and Applications to Circuit Design (SMACD), Lausanne, Switzerland, 15 - 18 July 2019, pp.149-152, (Full Text) identifier identifier

A Comparison of Impedance and Antenna Analyzers on the Basis of Machine Learning Assisted Limit of Detection Experiments

Kırımlı C. E., Kırımlı E. E.
International Workshop on Impedance Spectroscopy (IWIS), Chemnitz, Germany, 27 - 30 September 2022, pp.61-65, (Full Text) identifier identifier

"Do It Yourself" Peristaltic Pump and Flowcell for QCM Biosensor

Cetin I., Yilmaz G., Halilibrahimoglu H., Kirimli C. E.
21st National Biomedical Engineering Meeting (BIYOMUT), İstanbul, Turkey, 24 November - 26 December 2017, (Full Text) identifier

Books & Book Chapters

Piezoelectric Plate Sensor (PEPS) for Analysis of Specific KRAS Point Mutations at Low Copy Number in Urine Without DNA Isolation or Amplification

KIRIMLI C. E., Shih W. H., Shih W. Y.
in: Biosensors and BiodetectionMethods and Protocols, Volume 2: Electrochemical, Bioelectronic, Piezoelectric, Cellular and Molecular Biosensors, Ben Prickril, Avraham Rasooly, Editor, Humana Press, New York, NY, New-York, pp.327-348, 2019

Other Publications

Machine Learning Assisted Experimental Design Approach to Optimize Parameters for Photodynamic Antimicrobial Chemotherapy

Kırımlı E. E., Dumoulin F., Lhez S., İşci Ü., Kirimli C.
Other, pp.23, 2024